Rhizobium etli CIAT 652: RHECIAT_CH0000914
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Entry
RHECIAT_CH0000914 CDS
T00720
Symbol
groELch1
Name
(GenBank) 60 kDa chaperonin, heat shock protein
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rec
Rhizobium etli CIAT 652
Pathway
rec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RHECIAT_CH0000914 (groELch1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rec03019
]
RHECIAT_CH0000914 (groELch1)
03110 Chaperones and folding catalysts [BR:
rec03110
]
RHECIAT_CH0000914 (groELch1)
03029 Mitochondrial biogenesis [BR:
rec03029
]
RHECIAT_CH0000914 (groELch1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rec04147
]
RHECIAT_CH0000914 (groELch1)
Enzymes [BR:
rec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RHECIAT_CH0000914 (groELch1)
Messenger RNA biogenesis [BR:
rec03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RHECIAT_CH0000914 (groELch1)
Chaperones and folding catalysts [BR:
rec03110
]
Heat shock proteins
HSP60 / Chaperonin
RHECIAT_CH0000914 (groELch1)
Mitochondrial biogenesis [BR:
rec03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RHECIAT_CH0000914 (groELch1)
Exosome [BR:
rec04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RHECIAT_CH0000914 (groELch1)
Exosomal proteins of other body fluids (saliva and urine)
RHECIAT_CH0000914 (groELch1)
Exosomal proteins of breast cancer cells
RHECIAT_CH0000914 (groELch1)
Exosomal proteins of colorectal cancer cells
RHECIAT_CH0000914 (groELch1)
Exosomal proteins of bladder cancer cells
RHECIAT_CH0000914 (groELch1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ACE89899
UniProt:
B3PRB6
LinkDB
All DBs
Position
complement(922799..924436)
Genome browser
AA seq
545 aa
AA seq
DB search
MAAKEIKFGRTAREKMLRGVDILADAVKVTLGPKGRNVIIDKSFGAPRITKDGVSVAKEI
ELEDKFENMGAQMVREVASKTNDIAGDGTTTATVLAQAIVREGAKAVAAGMNPMDLKRGI
DLAVAEVVKDLQAKAKKINTSEEVAQVGTISANGERQVGLDIAEAMQKVGNEGVITVEEA
KTAETELEVVEGMQFDRGYLSPYFVTNPEKMVADLEDVFILLHEKKLSNLQSMLPVLEAV
VQTGKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEDLGIKLESVTLDMLGRAKKVSISKENTTIVDGSGAKSDIEGRVAQIKAQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRIDDALNATRAAVQEGIVPGGGVALL
RSSVKITAKGINDDQEAGVNIVRRALQAPARQIAENAGDEASIVVGKILDKDQDNWGYNA
QTGEYGDMIGMGIIDPVKVVRTALQDAASVASLLITTEAMIAELPKKDAPAMPGGMGGMG
GMDMM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagaaatcaagtttggccgcaccgcgcgcgaaaagatgctgcgcggcgtc
gacattctcgccgatgcagtcaaggtaacgctcggcccgaagggtcgtaacgtcatcatc
gacaagtccttcggcgcgccgcgcatcaccaaggacggcgtttcggtcgccaaggaaatc
gaactcgaagacaagttcgaaaacatgggcgcccagatggtccgcgaagttgcttcgaag
accaacgacatcgccggcgacggcaccacgaccgcaaccgttcttgcccaggcgatcgtt
cgcgaaggcgccaaggccgttgccgccggcatgaacccgatggacctgaagcgcggcatc
gatctcgccgtcgccgaagtcgtcaaggatctccaggccaaggccaagaagatcaacacc
tcggaagaagtcgcacaggtcggcacgatctcggcaaacggcgagcgccaggtcggtctc
gatatcgctgaagccatgcagaaggtcggcaacgaaggcgtcatcaccgtcgaagaagcc
aagaccgccgaaaccgaactcgaagtcgtcgaaggcatgcagttcgaccgcggctacctc
agcccctacttcgtcaccaacccggaaaagatggtcgccgacctcgaagacgtcttcatt
ctcctccacgagaagaagctctcgaacctgcagtcgatgctcccggttctcgaagccgtc
gtccagaccggcaagccgctcctcatcatcgctgaagacgtcgaaggcgaagcccttgct
acgctcgtcgtcaacaagctgcgtggcggcctgaagatcgctgccgtcaaggcccctggc
ttcggcgaccgccgcaaggccatgctcgaagacatcgccatcctgaccggcggcaccgtg
atctccgaagacctcggcatcaagctcgagagcgtcacgctcgacatgctcggccgtgcc
aagaaggtttcgatctccaaggaaaacaccacgatcgtcgacggttcgggcgccaagtcc
gacatcgaaggccgtgttgcccagatcaaggcccagatcgaagaaaccacctccgactac
gaccgcgagaagctgcaggaacgccttgccaagctcgccggcggcgttgccgtcatccgc
gtcggcggctcgacggaagtcgaagtgaaggaaaagaaggaccgcatcgacgacgccctc
aacgcgacgcgcgctgccgttcaggaaggtatcgtaccgggcggcggcgttgccctgctg
cgctcctccgtcaagatcaccgccaagggtatcaacgacgaccaggaagccggcgtcaac
atcgttcgccgcgcgctgcaggctccggcccgccagatcgctgagaacgcaggcgacgaa
gcctcgatcgttgtcggcaagatcctcgacaaggatcaggacaactggggttacaacgcc
cagaccggcgaatatggcgacatgatcggcatgggcatcatcgacccggtcaaggtcgtt
cgcaccgccctgcaggacgcggcttccgtcgcatcgctgctgatcaccaccgaagccatg
atcgccgagctgccgaagaaggacgctccggctatgccgggcggcatgggcggcatgggc
ggaatggacatgatgtga
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