Rhizobium etli CIAT 652: RHECIAT_CH0001398
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Entry
RHECIAT_CH0001398 CDS
T00720
Name
(GenBank) probable DNA-directed DNA polymerase protein (uracil-DNA glycosylase)
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rec
Rhizobium etli CIAT 652
Pathway
rec03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RHECIAT_CH0001398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rec03400
]
RHECIAT_CH0001398
Enzymes [BR:
rec01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RHECIAT_CH0001398
DNA repair and recombination proteins [BR:
rec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RHECIAT_CH0001398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ACE90378
UniProt:
B3PU74
LinkDB
All DBs
Position
complement(1381878..1382768)
Genome browser
AA seq
296 aa
AA seq
DB search
MISANDLSPAELAALLHFHADAGVEWLLEEEAVDRFAEFEAMKAARRPASAQQERPAAGE
RPSVGERQTSPRPTAAARPAPVSGPQPAIPDGEAVQQARFVAEAARSLGELKTAIEAFNG
CNLKHSARSTIFASGDAESGIMVIGSAPSAEDDREGLPFSGKSGQLFDKMLAAIGLNRSS
VLLTQVIPWRPPGNRAASAAEIDICRPFIERQIALAEPQAILLLGNFAARFFLGENDTIH
GLRGRWKDIVIADRAIPAIASLHPQDLLTAPVNKRLAWNDLLAFQAKLKSLSLLRN
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgatctccgccaacgacctctcccccgccgagcttgcagcgcttctgcatttccatgcg
gatgccggcgtggaatggctgctggaggaagaggcggtcgaccgtttcgccgagttcgag
gcgatgaaggccgcgcgccgcccggcgtcggcgcagcaggaacgccctgcggccggggag
cgccctagcgtcggagaacgtcagacatcgccgcgcccgactgccgcagcccgtccggcc
ccggtctccggcccgcagccggcgattccggacggcgaggcagtgcagcaggcgcgtttc
gtcgccgaagcggcgcgatcgctcggcgagttgaagaccgcgatcgaagccttcaacggc
tgcaacctcaagcacagcgcccgctcgaccatctttgccagcggcgatgccgagagcggc
atcatggtgatcggctcggcgccgagcgccgaagacgatcgtgagggcctgcccttctcg
ggtaagtccggccagttgttcgacaagatgctggcggcgatcgggctgaaccgctcgagc
gttctgctgacgcaggtcattccctggcgcccgccgggcaaccgcgcggcatcggcggcc
gagatcgacatctgccggcccttcatcgaacgacagatcgcgctcgccgaaccgcaggcg
atcctgctgctcggcaatttcgcagcgcgattcttcctcggggaaaacgatacgattcac
ggcctgcgggggcgctggaaagacatcgtcattgccgatcgtgccattccggccatcgcc
agcctgcatccccaggatctgttaaccgcacccgtcaacaagcggctggcctggaacgat
cttctcgccttccaggcaaaactgaaatccctgtctctgctcagaaattag
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