Rhizobium etli CIAT 652: RHECIAT_CH0001452
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Entry
RHECIAT_CH0001452 CDS
T00720
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase omega chain protein
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
rec
Rhizobium etli CIAT 652
Pathway
rec03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rec00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RHECIAT_CH0001452 (rpoZ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rec03021
]
RHECIAT_CH0001452 (rpoZ)
03400 DNA repair and recombination proteins [BR:
rec03400
]
RHECIAT_CH0001452 (rpoZ)
Enzymes [BR:
rec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RHECIAT_CH0001452 (rpoZ)
Transcription machinery [BR:
rec03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RHECIAT_CH0001452 (rpoZ)
DNA repair and recombination proteins [BR:
rec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RHECIAT_CH0001452 (rpoZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
MinE
Coatomer_E
Motif
Other DBs
NCBI-ProteinID:
ACE90431
UniProt:
B3PUN2
LinkDB
All DBs
Position
1439356..1439760
Genome browser
AA seq
134 aa
AA seq
DB search
MARVTVEDCIDKVENRFELVLLASHRARLISQGASITIDRDNDKNPVVALREIADETLSP
DDLKEDLIHSLQKHVEVDEPEPDPASMIAAGGVAAADSEEQDDLPETITFDQMSEEELLA
GIEGLVPPEKSDDY
NT seq
405 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtgtcacagttgaagattgcattgacaaggtagagaaccgctttgagctggtt
ctgctcgccagccaccgcgcccggctgatttcccagggggcctcgatcaccatcgatcgc
gacaatgacaagaatcctgtcgttgccctgcgcgaaatcgccgacgagacgctttcgccc
gacgatctcaaggaagatctgatccattcgctgcaaaagcatgtcgaagtcgacgagccc
gagcccgatccggccagcatgatcgccgccggcggtgttgccgccgccgacagcgaggag
caggacgacctgccggagacgattaccttcgaccagatgtcggaagaagagctgcttgcc
ggcatcgagggcctggtgccgccggaaaagagcgacgattattaa
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