Rhizobium etli CIAT 652: RHECIAT_CH0001563
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Entry
RHECIAT_CH0001563 CDS
T00720
Symbol
rnd2
Name
(GenBank) ribonuclease III protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rec
Rhizobium etli CIAT 652
Brite
KEGG Orthology (KO) [BR:
rec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rec03016
]
RHECIAT_CH0001563 (rnd2)
Enzymes [BR:
rec01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
RHECIAT_CH0001563 (rnd2)
Transfer RNA biogenesis [BR:
rec03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
RHECIAT_CH0001563 (rnd2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
wHTH-Calcineurin_assc
Motif
Other DBs
NCBI-ProteinID:
ACE90541
UniProt:
B3PVA0
LinkDB
All DBs
Position
complement(1550844..1551989)
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AA seq
381 aa
AA seq
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MIETTADLAAACKELAKSDFITIDTEFLRETTFWPELCLIQMASPTLEVLVDPLAKGIDL
APFFELMADTKVLKVFHAARQDIEIIFNRGNLIPHPIFDTQVAAMVCGFGDSVSYDQLVS
RIKNVHIDKSSRFTDWSRRPLSDKQLEYALADVTHLRDVYLSLKAELDREGRTSWLTEEM
NILEARETYDMHPDDAWQRLKMRLRKPQELAILKYVAAWREREARARNVPRSRVLKDDAI
YEIAQQQPKDAEALGRLRTIPKGWERSASGAAVVEAVNAALALPKADMPHVPRQTQAPEG
AAAAVELLKVLLKLISEKHGVAPKVIANSEDLDKIAADGEKADVAALHGWRRDLFGEPAL
QLIQGQIGLRFAGRKVETVAL
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaaccaccgccgatttggcggccgcctgcaaagagctggccaagtctgacttc
atcaccatcgacaccgaattcctgcgtgagacgaccttctggccggagctctgcctgatc
cagatggcaagcccgacattggaggttctcgtcgatccgctggccaagggcattgacctc
gcccccttcttcgagctgatggccgataccaaggtgctgaaggtctttcatgcggcgcgc
caggacatcgagatcatcttcaatcgcggcaatctcattccgcatccgatcttcgacacg
caggtcgccgccatggtctgcggtttcggggacagcgtctcctatgatcagctggtcagc
cgcatcaagaacgtccacatcgacaagtcgtcacgcttcaccgactggagccgccggccg
ctctccgacaagcagctggaatatgcgctggccgacgtcacgcatctgcgcgacgtctat
ctttcgctgaaagccgaactcgatcgcgaaggccgcacgtcctggctcaccgaggaaatg
aatattctcgaggcgcgcgaaacctatgacatgcaccctgacgacgcctggcagcggctg
aagatgcgtctgcgcaagccgcaggagctggcgatcctgaaatatgtcgccgcctggcgt
gagcgcgaggcgcgggcgcgcaatgtgccgcgttcgcgcgtattgaaggacgatgcgatc
tatgagatcgcccagcagcagccgaaggatgccgaagcgctcggccgcttgcgcaccatt
cccaaaggctgggaacgctccgcctccggcgctgccgtcgtcgaagccgtcaatgccgca
ctcgctctcccgaaggcggatatgccgcatgttccgcgacagacgcaggcgccggaaggc
gcagctgccgctgtcgagctgttgaaagtgctcttgaagctgatctcggaaaaacacggc
gtagcgccgaaggtgatcgccaacagcgaggatctcgacaagatcgccgccgatggcgag
aaggccgacgtcgctgccctgcacggctggcggcgcgatcttttcggtgaaccggcgctg
cagctgattcagggccagattggactgcgattcgccggccggaaggttgaaaccgtcgca
ctctga
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