Rhizobium etli CIAT 652: RHECIAT_CH0001577
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Entry
RHECIAT_CH0001577 CDS
T00720
Name
(GenBank) putative peptidoglycan binding protein (involved in cell wall degradation)
KO
K21470
L,D-transpeptidase YcbB
Organism
rec
Rhizobium etli CIAT 652
Brite
KEGG Orthology (KO) [BR:
rec00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rec01002
]
RHECIAT_CH0001577
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rec01011
]
RHECIAT_CH0001577
Peptidases and inhibitors [BR:
rec01002
]
Cysteine peptidases
Family C82
RHECIAT_CH0001577
Peptidoglycan biosynthesis and degradation proteins [BR:
rec01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
RHECIAT_CH0001577
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
ACE90555
UniProt:
B3PVB4
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All DBs
Position
1567371..1568675
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AA seq
434 aa
AA seq
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MSKKNGIEALSRRAFLASAATVGAGALAAGPAFAQSALDGLLNAPRRGNWDDQFDAKAAS
RTASAVVSNTPILGPQSVASAQQAIMQYQQIAAAGGWPEVNPGDQRLQLGVSHPAVQALR
QRLAITGDLPREAGMSSAFDSYVDGAVKRFQARHGLPSDGVLGEFTLKAMNIPADVRLQQ
LNTNLVRLQTFPEDLGRRHVMVNIPAAYVEAVEDGSVATRHTAVVGRLSRPTHLVNSKIY
EVILNPYWTAPRSIVEKDIMPLMRKDPTYLEKNAIRLIDGKGNEVAPETVDWNGEAPNLQ
FRQDPGKINAMASTKINFYNKNGEYMHDTPQQGLFNKLMRFESSGCVRVQNVRDLTNWLL
RETPGWSRQQMEQVIATGVNTPIKLATEVPVYFVYISAWGMPDGIVQFRDDIYQMDGNAE
LALDTTAGMEQPVQ
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagaaaaacggaattgaagctctttcgcgccgcgctttcctggcgtcggcggca
acggttggcgccggcgcgcttgctgccggacctgcattcgcgcaatcggcgctcgatggg
ctcctgaacgcgccgcgccgcggcaactgggacgaccagttcgacgccaaggcggcttcg
cgcacggcaagcgccgtcgtttccaacaccccgatccttggcccccagtcggtcgcgagc
gcccagcaggcgatcatgcagtaccagcagatcgccgccgctggcggctggcctgaagtc
aatcccggcgaccagcgcctgcagctcggcgtcagccaccccgccgtccaggcgctacgc
caacgtctggcgatcaccggcgacctgccgcgcgaagccggcatgtcgagcgccttcgat
tcctatgtcgacggcgccgtcaagcgcttccaggcgcgtcacggcctgccgtccgatggc
gtcctcggcgaattcacgctgaaggcgatgaacattcccgccgacgtccgtctgcagcag
ctgaacaccaaccttgtccgcctccagaccttcccggaagatctcggccgccgccacgtg
atggtcaatattccggccgcctacgtcgaggctgttgaagacggcagcgtcgcgacccgt
cacactgcggtcgtcggccgcttgagccgcccgacgcatctcgtcaattcgaagatctac
gaggtcatcctcaacccctattggaccgcgccgcgctcgatcgtcgagaaggacatcatg
ccgctgatgcgcaaggatccgacctatctcgagaagaacgccatccgcctgatcgacggc
aagggcaacgaagtcgcccccgaaaccgtcgactggaacggcgaagcgccgaacctgcag
ttccgtcaggaccccggcaagatcaacgccatggcctcgaccaagatcaacttctacaac
aagaacggcgagtatatgcacgacacgccgcagcaaggcctgttcaacaagctgatgcgc
ttcgaatcctctggctgcgtccgcgtccagaacgtgcgcgacctgacgaactggctgctg
cgcgagacccccggctggagccgccagcagatggagcaggtgattgcaaccggcgtcaac
acgccgatcaagctcgccaccgaagtcccggtctatttcgtctacatctccgcctggggc
atgcccgacggcatcgtccagttccgcgacgacatctatcagatggacggcaatgccgaa
ttggcgctcgataccacggctggcatggaacagccggtgcaataa
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