Rhizobium etli CIAT 652: RHECIAT_CH0001662
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Entry
RHECIAT_CH0001662 CDS
T00720
Symbol
hrm
Name
(GenBank) bacterial nucleoid DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
rec
Rhizobium etli CIAT 652
Brite
KEGG Orthology (KO) [BR:
rec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rec03032
]
RHECIAT_CH0001662 (hrm)
03036 Chromosome and associated proteins [BR:
rec03036
]
RHECIAT_CH0001662 (hrm)
03400 DNA repair and recombination proteins [BR:
rec03400
]
RHECIAT_CH0001662 (hrm)
DNA replication proteins [BR:
rec03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RHECIAT_CH0001662 (hrm)
Chromosome and associated proteins [BR:
rec03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
RHECIAT_CH0001662 (hrm)
DNA repair and recombination proteins [BR:
rec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
RHECIAT_CH0001662 (hrm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF2267
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
ACE90639
UniProt:
B3PVY7
LinkDB
All DBs
Position
1656291..1656566
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AA seq
91 aa
AA seq
DB search
MNKNELVSAVAEKAGLTKSDAASAVDAVFDVVQAELKNKGDIRLAGFGSFTVSHRAASKG
RNPSTGAEVDIPARNVPKFTPGKGLKDAVNG
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaatgaactcgtgtccgcagtggccgaaaaggcaggactgacgaagtctgac
gcggcttccgctgtcgacgcggttttcgacgttgtccaggctgaactcaagaacaagggc
gacatccgcctcgcagggttcggcagcttcaccgtttctcatcgcgcagcatcgaagggc
cgcaacccgtccaccggcgctgaagtcgacattccggctcgcaacgtgccgaagttcacg
cccggcaagggcctgaaggacgccgtcaacggctga
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