Rhizobium etli CIAT 652: RHECIAT_CH0001711
Help
Entry
RHECIAT_CH0001711 CDS
T00720
Symbol
topA
Name
(GenBank) DNA topoisomerase I protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rec
Rhizobium etli CIAT 652
Brite
KEGG Orthology (KO) [BR:
rec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rec03032
]
RHECIAT_CH0001711 (topA)
03400 DNA repair and recombination proteins [BR:
rec03400
]
RHECIAT_CH0001711 (topA)
Enzymes [BR:
rec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
RHECIAT_CH0001711 (topA)
DNA replication proteins [BR:
rec03032
]
Prokaryotic type
DNA Topoisomerases
RHECIAT_CH0001711 (topA)
DNA repair and recombination proteins [BR:
rec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RHECIAT_CH0001711 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Motif
Other DBs
NCBI-ProteinID:
ACE90685
UniProt:
B3PW33
LinkDB
All DBs
Position
complement(1704967..1707621)
Genome browser
AA seq
884 aa
AA seq
DB search
MNVVVVESPAKAKTINKYLGSGYKVLASFGHVRDLPAKDGSVLPDQDFEMLWEVDGASAK
RMKDIADAVKSSDGLFLATDPDREGEAISWHVLDMLNKKRVLNGKSVKRVVFNAITKKAV
LDAMADPRDIDVPLVDAYLARRALDYLVGFNLSPVLWRKLPGARSAGRVQSVALRLVCDR
ESEIERFISEEYWNLSALLKTPRGDEFEARLVSANGKRLPPRAIGNGEDAGRLKALLEGA
SYIVDTVEAKPVKRNPGPPFTTSTLQQAASSNLGFSASRTMQIAQKLYEGVDIGGETVGL
ITYMRTDGVQMAPEAIDAARRAILDQFGERYLPEKARFYSTKAKNAQEAHEAIRPTDFYR
SPDRLRKFLDADQIRLYELIWKRGIASQMASAEIERTTAEITADNKGEKAGLRAVGSVIR
FDGFIAAYTDQKEDGEQSDDGDEDGRLPEINARETLAKQKINSTQHFTEPPPRYSEASLI
KKMEELGIGRPSTYAATLATLRDRDYVTIDKRKLIPQAKGRLVTAFLESFFTKYVEYDFT
ADLEEKLDRISAGELNWKQVLRDFWKDFFAQIEDTKELRVTNVLDSLNEALAPLVFPKRE
DGSDPRICQVCGTGNLSLKLGKYGAFVGCSNYPECNYTRQLSSENGGEAEGVALNEPKNL
GTDPTTGEELTLRSGRFGPYIQRGDGKEAKRASLPKGWKPEDIDYEKAMALISLPRDIGK
HPETGKMISSGIGRYGPFLLHDGSYANLETVEDVFSVGLNRAVTVIAEKANKAPGRGARG
TPAALKTLGDHPDGGAITVRDGKYGPYVNWGKVNATLPKGKDPQAITVEEALALITEKAG
KAPVGKPARAKAKPKAAAAEAKATKTAAKPKTTKAKAPAKAKKG
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttgtagtggtggaatcgcctgccaaggccaagacgatcaacaagtatctgggt
tcgggatacaaagtgctcgcctccttcggacatgtgcgcgatctgcctgccaaggatggc
tcggtcctccccgatcaggatttcgaaatgctctgggaggtcgacggagcctcggccaag
cggatgaaggatattgccgacgcggtgaaatcctctgacggcctgtttctggcgaccgac
ccggatcgggaaggcgaagcgatttcctggcacgttctcgacatgttgaacaagaagcgg
gtgctgaacggcaaatccgtcaagcgcgtggtcttcaacgcgatcaccaagaaggcggtg
ctcgatgcgatggccgatccgcgcgacatcgacgtgccgctggtcgacgcttatctggcg
cgccgcgcgctcgactatctcgtcggcttcaatctttcgccggtcctgtggcgcaagctg
cccggcgcgcgttcggccggacgcgtccagtcggtggcgcttcgtctggtctgcgaccgt
gaatccgagatcgagcgcttcatttcggaagaatattggaacctctcggcgcttctgaag
acgccgcgcggcgacgagttcgaggcaagactggtttcggcgaacggcaaacggctgccg
ccgcgcgccatcggcaatggcgaggatgccggccgcctgaaagcattgctcgaaggcgcg
agctatatcgtcgacacggtcgaggcgaagccggtcaagcgcaacccgggaccgccgttt
acgacctcgacactgcagcaggccgcctcctccaatcttggcttctccgcgtcgcgcacc
atgcagatcgcccagaagctctatgaaggcgtcgatatcggcggcgagacggtcggtctc
atcacctatatgcgaaccgacggcgtgcagatggcgcccgaggcgatcgacgcagcgcgg
cgcgccatcctcgaccagttcggcgaacgctacctgcctgaaaaggcacgcttctattcg
accaaggcgaaaaacgcccaggaggcgcacgaggcgatccgtcccaccgatttctaccgc
tcgcccgatcgtctgcgcaagttcctcgacgccgaccagatccggctctacgagctgatc
tggaagcgcggcatcgccagccagatggcgtccgccgaaatcgagcgcacgacggctgaa
atcaccgccgacaacaagggcgagaaggccggcctgcgcgcagtcggctcggtcatccgc
ttcgacggcttcatcgccgcctataccgaccaaaaggaggacggcgagcagagcgacgac
ggcgacgaggatggccgtctgccggagatcaatgcgcgcgagacgctcgccaagcagaag
atcaattcgacgcagcatttcacagaaccgccgccgcgttattccgaagcctcgctgatc
aagaagatggaagagctcggcatcggtaggccctccacctatgcggcgacgctggcgacg
ctgcgcgaccgcgactatgtgacgatcgacaagcgcaagctgatcccgcaggccaagggc
cggctggtgaccgccttcctcgagagcttcttcaccaaatatgtcgaatacgacttcacg
gccgacctcgaggaaaagctcgaccggatttcggccggcgagttgaactggaagcaggtg
ctgcgcgatttctggaaggattttttcgcgcagatcgaggacaccaaggaattgcgcgtc
accaacgtgctcgattcgctgaacgaggcgctggcgccactggtcttcccgaagcgcgaa
gatggcagcgaccccaggatctgccaggtctgcggcacaggcaacctgtcgctgaagctc
ggcaaatacggcgccttcgtcggctgctcgaattatccggaatgcaactacacccgtcag
ctctcctccgagaacggcggagaagcggaaggggtcgccctcaacgagccgaagaacctc
ggcaccgatccgacgaccggcgaagagttgacgctgcgctcgggccgcttcggcccctat
atccagcgcggcgacggcaaggaggccaaacgcgcttcgctgccgaaaggctggaagccg
gaggatatcgattatgaaaaggcgatggcgctgatttcgctgccgcgcgatatcggcaaa
catcccgaaaccggcaagatgatttcatcgggcatcggccgctatgggccgttccttctg
catgacggttcctacgccaatctggaaaccgtcgaggacgtgttctcggtcggcctcaac
cgcgccgtgaccgtcatcgccgaaaaggcgaacaaggcgccgggccgaggtgcccgcggc
acgccggcggcactgaagacgctcggcgatcatcccgacggcggcgccatcaccgttcgc
gacggcaaatacggcccctatgtcaactggggcaaggtcaacgcgaccctgccgaagggc
aaggatccgcaggcgatcactgtcgaggaggcgctggcgctgatcacggagaaggccggc
aaggcgcccgtcggaaagccggccagggcgaaagccaaaccgaaggcagctgcggctgaa
gccaaggccaccaagacggccgcgaagccgaagacaacgaaggcgaaggcgccggcgaaa
gcgaaaaagggctga
DBGET
integrated database retrieval system
