Rhizobium etli CIAT 652: RHECIAT_CH0002244
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Entry
RHECIAT_CH0002244 CDS
T00720
Symbol
holB
Name
(GenBank) DNA polymerase III protein, delta prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
rec
Rhizobium etli CIAT 652
Pathway
rec03030
DNA replication
rec03430
Mismatch repair
rec03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RHECIAT_CH0002244 (holB)
03430 Mismatch repair
RHECIAT_CH0002244 (holB)
03440 Homologous recombination
RHECIAT_CH0002244 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rec03032
]
RHECIAT_CH0002244 (holB)
03400 DNA repair and recombination proteins [BR:
rec03400
]
RHECIAT_CH0002244 (holB)
Enzymes [BR:
rec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RHECIAT_CH0002244 (holB)
DNA replication proteins [BR:
rec03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RHECIAT_CH0002244 (holB)
DNA repair and recombination proteins [BR:
rec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RHECIAT_CH0002244 (holB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_22
nSTAND3
AAA_16
Mg_chelatase
RuvB_N
AAA_14
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
ACE91200
UniProt:
B3Q0J6
LinkDB
All DBs
Position
complement(2246903..2247928)
Genome browser
AA seq
341 aa
AA seq
DB search
MSEERPGLLDGAIWPAENTMLFGHEEAEAFLAQSYRSGKGHHAILIEGPEGIGKATLAFR
FANHVLSHPDPQTAPEAIGDPDPDSAVSRQIVSGASHNLLHLARPVDEKTGKVKSAITVD
EVRRAGKFFSQTSGTGNWRIVIIDPADDMNRNAANAILKILEEPPKRALFLVLSHAPGRL
LPTIRSRCLPLKLSPLSDEALAAALDHLGITGEGGAVLAAAKGSVGEALKLLNYGGGEII
AAYDEVLSAQGPAARKAMHRLADALSGKESDTIFDFFVSHVGDDIMNRARVAAGKGEIAT
AERLARLYSDITERLAISSAYNLDRKQTVISILADIKQPGL
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaggagaggccgggactgctcgacggcgccatctggcccgccgaaaataccatg
ctgttcggccatgaggaggcggaggccttcctcgcgcaatcctaccgatccggcaaaggg
catcatgccatcctgatcgaaggaccggagggcatcggcaaggcgacactcgccttccgc
ttcgccaaccacgtactctcgcatcccgatccccagacggcacccgaggcgatcggcgat
ccggatcctgattccgccgtcagccggcagatcgtctccggcgcctcgcacaacctcttg
catcttgcccggccggtcgacgaaaagaccggcaaggtgaaatcggcgataacggtcgac
gaggtgcgccgcgccggcaagttcttctcgcagacgtcgggcaccggcaactggcggatc
gtcatcatcgatccggccgacgacatgaaccgcaatgcggccaacgccattctgaaaatc
ctcgaggaaccgccgaagcgggcgctgtttctggtgctgtcgcatgcaccgggtcggctg
ttgccgacgatccgctcgcgctgcctgccactgaaactgtcgccgctttcggacgaggcg
ctggcggcagcccttgatcatctcggcataacgggtgagggcggggcggtgcttgcggcg
gccaagggcagtgtcggcgaagccctgaaactcctgaactatggcggcggagagatcatc
gcggcctatgacgaggtgctttccgcccaagggccggcggcccgcaaggcgatgcaccgg
ctggccgatgcgctgtcgggcaaggaaagcgatacgatcttcgatttcttcgtcagccat
gtcggcgacgacatcatgaaccgtgcgcgtgtggcagcgggcaagggggaaatcgccacc
gccgagcggctggcgcggctctattccgacatcaccgagcggctggccatttccagcgcc
tataatctcgatcgcaaacagacggtcatcagcattctcgccgacatcaagcagcctggc
ctttag
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