Rhizobium etli CIAT 652: RHECIAT_CH0002567
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Entry
RHECIAT_CH0002567 CDS
T00720
Symbol
ddlA
Name
(GenBank) D-alanine-D-alanine ligase protein
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
rec
Rhizobium etli CIAT 652
Pathway
rec00470
D-Amino acid metabolism
rec00550
Peptidoglycan biosynthesis
rec01100
Metabolic pathways
rec01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rec00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RHECIAT_CH0002567 (ddlA)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RHECIAT_CH0002567 (ddlA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RHECIAT_CH0002567 (ddlA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rec01011
]
RHECIAT_CH0002567 (ddlA)
Enzymes [BR:
rec01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
RHECIAT_CH0002567 (ddlA)
Peptidoglycan biosynthesis and degradation proteins [BR:
rec01011
]
Precursor biosynthesis
Amino acid ligase
RHECIAT_CH0002567 (ddlA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATP-grasp_3
ATP-grasp_4
DUF6471
RimK
Ins134_P3_kin
Motif
Other DBs
NCBI-ProteinID:
ACE91519
UniProt:
B3PQU6
LinkDB
All DBs
Position
2576016..2577092
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AA seq
358 aa
AA seq
DB search
MTPSPNRLRIAVLFGGRSAEHEVSILSATNVMGALAPEKYDAVPIFISREGQWLLSSIVD
GALATPSSGTEICLVPGGRGRMMAIPAGGTPYDLPGIDILFPVLHGPYGEDGSVQGLAEV
ARVPLAGCGILGSAAALDKDIAKRLLRAAGLPVARAVTIRADAAPSLATLESELGLPLFI
KPARQGSSVGVAKVHASQEFAPALAEAFRHDHTLLAEEFVAGREIEFSVLENAAGELFVS
RPGEIVPAESHGFYNYDAKYIDENGAALKVPAELPPDVEATMRDMAAKAFRAVGCDGMAR
VDFFLTSDMRFLINEINTIPGFTDISMYSKAMAASGVSYAEVIDRLVDHGMARAGRTG
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgaccccgtccccaaacaggctgcgcatcgccgtgctcttcggcggccgctcggccgaa
catgaggtttccatcctttcggcaaccaatgtcatgggcgccctggcgcccgagaaatac
gacgccgttcccattttcattagccgcgagggacagtggctgctcagcagcatcgtggac
ggcgccttggcgacaccgtcatccggcacagaaatctgcctcgtgccgggcggacgtgga
cggatgatggcgatcccggccggtgggacgccatatgatttgccagggatcgacatcctg
ttccctgtgctgcacggcccgtacggcgaagacggatcggtgcagggtctggcggaggtc
gcccgcgtgccgctcgccggctgcggcatcctcggctcggccgccgcactcgacaaggat
atcgccaagcgcctgttgcgggcagcaggcctgccggtggcgcgcgccgtgaccatccgt
gcggatgccgccccttcgctggcaaccctcgaaagcgagctcggcctgccgctcttcatc
aaaccggcgcgacagggatcgtcggtcggcgtcgccaaggtccatgccagccaggaattc
gcgcccgcccttgcggaggccttccgccacgatcacacgttgctggccgaagaatttgtt
gccggccgcgagatcgaattcagcgtgctggagaatgcggcaggcgaactcttcgtctcc
cggccgggcgagatcgtcccggcggaaagccacggcttctacaattacgatgccaaatat
atcgacgagaacggcgcggcgctgaaagtgccggccgagctgccgccggacgtcgaggcc
accatgcgcgacatggccgcaaaggccttccgggctgtcggctgcgacggcatggcgcgc
gtcgatttcttcctgacatcggacatgcggttcctcatcaacgagatcaacaccatcccc
ggctttaccgatatcagcatgtattccaaggcgatggcggcaagcggcgtcagctatgcc
gaggtcattgaccggctcgtcgatcacggcatggcgcgcgccggccggacaggctga
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