Rhizobium etli CIAT 652: RHECIAT_CH0003000
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Entry
RHECIAT_CH0003000 CDS
T00720
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase protein
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
rec
Rhizobium etli CIAT 652
Pathway
rec00470
D-Amino acid metabolism
rec00550
Peptidoglycan biosynthesis
rec01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rec00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RHECIAT_CH0003000 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RHECIAT_CH0003000 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rec01011
]
RHECIAT_CH0003000 (murD)
Enzymes [BR:
rec01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
RHECIAT_CH0003000 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
rec01011
]
Precursor biosynthesis
Amino acid ligase
RHECIAT_CH0003000 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
2-Hacid_dh_C
NAD_binding_2
KARI_N
TrkA_N
CbiA
Motif
Other DBs
NCBI-ProteinID:
ACE91949
UniProt:
B3PTW2
LinkDB
All DBs
Position
complement(3002882..3004294)
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AA seq
470 aa
AA seq
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MIPVTTLKDRKVALFGLGGSGFATARALILGGVRVTAWDDNPDSVAKAAAEGIHTEDLHT
IDWSQQSLFVLSPGVPLTHPKPHWTVDLARAAGVDIVGDVELFVRERRAHAPDCPFIAIT
GTNGKSTTTALIAHILRSAGYDTQLGGNIGTAVLTLDPPKAERYYVVECSSYQIDLAPTL
NPSAGILLNLTPDHLDRHGTMQHYADVKERLVAGSDVAVVGIDDSHSALIADRVQRAGVK
MVRISRRNVVADGIYAEGTKLVQAAGGAMLPFADLDGIQTLRGSHNAQNAAAAVAACLAV
GVSADDIRAGLASFPGLKHRMQPVGRRGRVVFVNDSKATNADAAAPALSSYDRIYWIAGG
LPKSGGITTLAPYFPRIAKAYLIGEAAAEFAATLGEAVPYEISGTLERAVAHAAADADRD
EAAASAVMLSPACASFDQYKNFEVRGDAFVSHVAALDGMTMLIGPVAGEK
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgattccggtcacgacgctgaaagacaggaaggtcgcgctcttcgggctcggcggctcc
ggctttgccaccgcgcgggcgctgatcctgggcggcgtccgtgtgaccgcctgggacgac
aaccctgacagcgtcgcgaaggccgcggcagaaggcatccacaccgaggatctgcacacg
atcgactggagccagcagtcgcttttcgtgctttcgcccggcgtgccgctcacacatccg
aagccgcactggacggtcgatctggcgcgcgcagccggcgtcgatatcgtcggcgacgtc
gagctcttcgtgcgcgagcgccgcgcccacgcgccggattgccccttcatcgccatcaca
ggcaccaacggcaaatcgacgacgacggcgctgatcgcccatatcctgagatcagcaggt
tacgacacacagctcggcggcaatatcggcacggccgtgctgacgctcgatccgccgaag
gcagaacgttattacgtcgtcgaatgctcctcctaccagatcgatctggcgccgacgctg
aacccgtcggccggcatcctgctcaatctgacgcccgatcacctcgaccgtcacggcacc
atgcagcattatgccgacgtcaaggagcggctggtcgccggcagcgatgtcgcggtcgtc
ggcattgacgatagccattcggcgctgatcgccgaccgcgtgcagcgagccggcgtcaag
atggtccgcatctcgcgccgcaacgtggtggccgatggcatctatgccgagggcacgaaa
ctcgtccaggccgccggcggcgccatgctgcccttcgccgatctcgacggcattcagacg
ctgcgcggcagccacaatgcgcagaatgccgcggctgccgttgccgcctgccttgcggtc
ggtgtgtccgccgacgacattcgcgccggccttgcctcatttcccggtctcaaacatcgc
atgcagccggtcggccgacgtggccgagtcgtcttcgtcaacgattccaaggccaccaat
gccgatgcggcggcgccggccctgtcgagctacgaccgtatctactggattgccggcggc
ctgccgaaatctggcggcatcacgacgcttgccccttattttccgcgtatcgccaaggcc
tacctgatcggcgaggcggcggcggaattcgcggcgaccctcggcgaggccgtgccctac
gaaatttccggcacgctggagcgcgccgtcgcgcatgccgcagccgacgcggatcgcgac
gaggcggctgcttcggccgtgatgttatccccggcttgcgcaagcttcgaccagtataag
aacttcgaagtcaggggcgatgccttcgtcagccacgtggcggcacttgacggaatgacg
atgctgatcggtcctgtagcaggagagaaatga
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