Rhizobium etli CIAT 652: RHECIAT_CH0003072
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Entry
RHECIAT_CH0003072 CDS
T00720
Symbol
cinR
Name
(GenBank) autoinducer transcriptional regulator protein
KO
K20252
LuxR family transcriptional regulator, quorum-sensing system regulator CinR
Organism
rec
Rhizobium etli CIAT 652
Pathway
rec02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rec00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RHECIAT_CH0003072 (cinR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rec03000
]
RHECIAT_CH0003072 (cinR)
Transcription factors [BR:
rec03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
RHECIAT_CH0003072 (cinR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
Sigma70_r4_2
HTH_23
HTH_10
Gemini_AL1_M
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
ACE92021
UniProt:
B3PUE0
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Position
3080985..3081767
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AA seq
260 aa
AA seq
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MPCILDGPHGRIERIGTVERIENTYSDKFEPAFEQIKAAPNVDAAIRILQAEYGLDFVTY
HLAQTIASKIDSPFVRTTYPDAWVSRYLLNSYVKVDPIVKQGFERQLPFDWSEVEPTPEA
YAMLVDAQKHGIGGNGYSIPVADKAQRRALLSMNARIPADGWSELVRRCRNEWIEIAHLI
HQKAVYELYGEHDPVPALSPREIECLHWTALGKDYKDISVILGISEHTTRDYLKTARFKL
GCATISAAASRAVQLRIINP
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgccttgtattttagacggtcctcacggtaggattgagcgaattgggacggtggaaagg
attgagaatacttacagcgacaagttcgaacccgctttcgaacagatcaaggctgcgccc
aatgtggatgccgccatccgtattctccaggcggaatatggcctcgatttcgtcacctac
catctcgcccagacgatcgcgagcaagatcgattcgcccttcgtgcgcaccacctatccc
gatgcctgggtctcgcgctacctcctgaacagctatgtgaaggtcgatccgatcgtcaag
cagggcttcgaacgccagctgcccttcgactggagcgaagtcgagccgacgccggaggcc
tatgccatgctggtcgatgcccagaagcacggcatcggcggcaatggttattccattccc
gttgccgacaaggcgcagcgccgggcgctgctgtcgatgaatgcgcgcatcccggccgac
ggctggagcgaactcgtgcgtcgctgccgcaacgaatggatcgagatcgcccatctgatc
catcagaaggccgtctatgaactgtacggcgaacatgatccggtgccggccttgtcgcca
cgcgagatcgagtgcctgcactggaccgcactcggcaaggattacaaggatatctcggtg
atcctgggcatttccgagcacaccacccgcgactatctgaagaccgcccgcttcaagctc
ggctgcgccacgatttcggcggccgcctcgcgggcggtgcagctgcgcatcatcaatcca
tag
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