Rhizobium etli CIAT 652: RHECIAT_CH0003134
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Entry
RHECIAT_CH0003134 CDS
T00720
Name
(GenBank) putative uracil DNA glycosylase protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rec
Rhizobium etli CIAT 652
Pathway
rec03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RHECIAT_CH0003134
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rec03400
]
RHECIAT_CH0003134
Enzymes [BR:
rec01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RHECIAT_CH0003134
DNA repair and recombination proteins [BR:
rec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RHECIAT_CH0003134
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4130
UDG
DUF2026
Motif
Other DBs
NCBI-ProteinID:
ACE92082
UniProt:
B3PUK1
LinkDB
All DBs
Position
complement(3142875..3144329)
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AA seq
484 aa
AA seq
DB search
MRRVVLAGRGELGEWRDAARALAAAGIVPDEIDWREKSTEADLSFQRDAMPPAPAASRKP
MTVPPAFIELAETVLCHSDPARFALLYRLLWRLQLDRQLLEVTSDQDVVRARLMAKNVHR
DAHKMTAFVRFKEVGAISAGRRKFIAWFEPDHHIIRRTAPFFQRRFTDMDWLIATPKGSA
AWDGERLTISDEPCEKPNLTDVTDELWRTYYASIFNPARVKLKAMQAEMPKKYWKNLPEA
DLIPGLIASAESKVREMAAREATRSLPFHDRLQQAARNLPTEPEAPAGTLEALRAQASVC
TRCPLHANATQTVFGEGPRDAAVMFVGEQPGDQEDIAGRPFVGPAGRLFDQVMAEAGIDR
SMVYVTNSVKHFKYEPRGKRRIHQKPTMGEVKHCRWWLDLELALVEPKLIVAMGATALAA
LTDVKGRLQDVRGKAMAIEGGRTLFVTVHPSYLLRIPDERLKAEEMARFRQDMLEIQGLM
TSAG
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgggttgtgctcgcaggacgcggagagcttggcgaatggcgcgatgccgcacgc
gccttggcggccgccggcatcgtgcccgacgagatcgactggcgcgagaaaagcacggag
gccgatctttcctttcagcgcgacgccatgccgccggcgccggcggcatcacgcaagccg
atgaccgtgccgcccgccttcatcgagcttgccgagacggtcctctgtcactccgatccg
gcgcggtttgcgctgctttaccgcctgctctggcggctgcagctggaccggcagctgctc
gaggtgacctccgaccaggatgtcgtgcgtgcccggctgatggcgaaaaacgtgcatcgc
gacgcgcacaagatgacggccttcgtccgcttcaaggaggtcggcgcgatttccgcgggg
cggcggaaattcatcgcctggttcgagcccgaccaccacatcatcaggcgcacggcaccc
ttcttccagcggcgtttcacagacatggactggttgatcgccacgcccaaggggtcggcc
gcctgggatggcgagcggctgacgatcagcgacgaaccctgcgagaagcccaatcttacc
gacgtaaccgatgagctctggcgcacctattacgccagcatcttcaatccggctcgggtg
aagctgaaggcgatgcaggcggaaatgccgaaaaaatactggaagaacctgccggaagcc
gatctcattcctggcttgatcgcatcggccgaaagcaaggtgcgggagatggcggcaagg
gaggcaacgcgctcgctgccctttcacgaccggctgcagcaggctgcgcgcaatcttccc
acagaacccgaagcgccggccggcacgctggaggcgctgcgcgcgcaagcctccgtctgc
acccgttgtccgcttcacgccaacgccactcaaaccgtgttcggcgaggggccgcgcgat
gcggcggtgatgttcgtcggcgagcagccgggcgatcaggaggatattgcaggacgcccc
ttcgtcggcccggccggccggcttttcgatcaggtcatggcggaggcgggcatcgaccgt
tcgatggtctacgtcaccaactcagtcaagcatttcaaatacgagccgcgcggcaagcgg
cgcatccaccagaagcccactatgggcgaagtgaagcattgccgctggtggctcgatctg
gaattggcgctcgtcgagccgaagctgatcgtcgccatgggggcgacggcgcttgcggcg
ctgaccgatgtgaaagggcgcctgcaggacgtcagaggcaaggcaatggcaatcgaagga
gggcgcacgctcttcgtgacggtgcatccatcctatctgctgcgcattcccgacgagcgg
ttgaaggcggaggagatggcgcgctttcgtcaggatatgttggaaattcaggggcttatg
acgtcagccggataa
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