Rhizobium etli CIAT 652: RHECIAT_CH0003209
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Entry
RHECIAT_CH0003209 CDS
T00720
Symbol
papS
Name
(GenBank) poly(A) polymerase protein
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
rec
Rhizobium etli CIAT 652
Pathway
rec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RHECIAT_CH0003209 (papS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rec03019
]
RHECIAT_CH0003209 (papS)
Enzymes [BR:
rec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
RHECIAT_CH0003209 (papS)
Messenger RNA biogenesis [BR:
rec03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
RHECIAT_CH0003209 (papS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
ACE92157
UniProt:
B3PV32
LinkDB
All DBs
Position
complement(3215604..3216737)
Genome browser
AA seq
377 aa
AA seq
DB search
MGLPVSDIDIATTLTPEIVIERAAAAGIKAVPTGLQHGTVTLVIDGKPFEVTTLRTDVET
DGRHAKVAFSTDWKADAERRDLTINALYADARGEVVDLVGGLADIEARNIRFIGDAATRI
AEDHLRILRFFRFFAYYGSGRPDAEGLKACAAARSKLKTLSAERVWSELRKLLGAADPGR
ALLWMRQVAVLTEILPETERWGIDAIPALVATEKALGWAPDPLLRLAAIVPPDAARLEAL
AARLKLSNAEAATLKAWAMAAPIDDEISSAAFERLLYRNGADGITTRLKLALGVARGKAE
GDLSEMARSARLGKLLDRAMTWKKPQFPVNGADVIAAGIPSGPRVGELLGSLENQWVEEN
FASDRAELLARLQERVQ
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgggcttgccggtcagcgatatcgatatcgccacgacgctgacgcccgagatcgtgatc
gagcgagcggcggcggccggaatcaaggcggtgccgaccggcctgcagcacggcacggtg
acgctcgtcatcgacggcaagcctttcgaggtgacgacgcttcgcaccgacgtcgagacc
gatgggcgtcatgccaaagtggccttcagcactgactggaaggccgatgccgaacggcgg
gacctgacgatcaacgcgctctatgccgatgcgagaggcgaggtggtggatctcgtcggt
gggcttgccgacatcgaggcgcgcaacatccgcttcatcggcgatgcggcaacgcgtatt
gccgaggaccatctgcgcatcctgcgcttcttccgtttctttgcctattacggttccggg
cgtccggatgccgaagggctgaaggcctgtgcggcggcgcgttcgaaactgaagacgctg
tctgccgaacgtgtgtggtcggagctcagaaaactgcttggtgccgccgatcccggccgg
gcgctgctctggatgcggcaggtggcggtgctgacggaaatcctgccggagaccgaacga
tgggggatcgatgcgatccccgcgctggttgccaccgaaaaggcgctcggctgggcgccc
gacccattgctgcgccttgcagcgatcgtgccgcccgatgcggcgcggctggaggcgctt
gcggcccggctgaagctctcgaatgcggaagcggccactctcaaggcctgggcgatggcg
gcaccgatcgacgacgaaatctcgtcggccgccttcgagcggctgctttaccgcaacggc
gcggacggcatcacgacgcgcctgaagctggcgcttggcgtcgcacgcgggaaggccgag
ggcgatcttagcgagatggcgcgctcggcgcggctcggaaagctcctggatcgggccatg
acgtggaagaagccgcagtttcccgtgaatggtgcagacgtgatcgcggcgggcatccca
tccggcccgcgtgtcggcgaactgcttggcagcttggaaaatcagtgggtggaggaaaac
ttcgcgtccgatcgagcagaacttctcgcgaggttgcaggaacgcgtacaatag
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