Rhizobium etli CIAT 652: RHECIAT_CH0003931
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Entry
RHECIAT_CH0003931 CDS
T00720
Name
(GenBank) putative spermidine/putrescine ABC transporter, substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
rec
Rhizobium etli CIAT 652
Pathway
rec02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rec00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RHECIAT_CH0003931
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rec02000
]
RHECIAT_CH0003931
Transporters [BR:
rec02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
RHECIAT_CH0003931
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
Ral
Phosphonate-bd
Motif
Other DBs
NCBI-ProteinID:
ACE92868
UniProt:
B3Q0S7
LinkDB
All DBs
Position
3989141..3990301
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AA seq
386 aa
AA seq
DB search
MTNLLKSCMAGVACLSFATQVIAAEPLKALGKGEGAVSIVAWAGYIERGETDKNYDWVTG
FEKDTGCKVSVKTAATSDEMVSLMNEGGFDLVTASGDASLRLIAGKRVQPINTDLIPSFK
NVDNRLQKGAWYTVGDVHYGVPYLWGPNVLMYNTDAFKDKAPTSWNVVFEEQTLPDGKSN
KGRVQAYDGAIYIADAAMYLMAHKPDLGIKDPYELTEDQYKAALDLLRGQRKLVSRYWHD
AMIQIDDFKNEGVVASGSWPFQVNLLQADKQKIASTFPEEGVTGWADTTMLHADSEHPNC
AYMWMEHSLQAKVQGDAAAWFGAVPSVPAACKGNELMGETGCATNGFDHFDKIKFWKTPV
AKCATQGECVPYHRWVSDYIGVIGGR
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatctcttgaaatcctgcatggcaggagtggcctgcctcagcttcgcgacacag
gtgatcgccgccgaaccgctgaaggcgctcggcaagggcgaaggcgccgtcagcatcgtc
gcctgggccggctacatcgagcgcggcgaaaccgacaagaattacgactgggttaccggc
ttcgaaaaggacaccggctgcaaggtctccgtcaaaaccgccgccacctcggatgaaatg
gtatcgctgatgaacgagggcggcttcgatctcgtgaccgcatcgggcgacgcgtccctc
cgcctcatcgccggcaaacgtgtccagccgatcaacaccgatctgatcccgagcttcaag
aatgtcgacaatcgcctgcagaagggcgcctggtatacggtcggcgacgtgcattacggc
gtgccctatctctgggggccgaatgtgctgatgtataataccgatgccttcaaggacaag
gcgccgaccagctggaacgtcgtcttcgaggagcagacgctgccggacggcaagtcgaac
aagggccgcgtccaggcctatgacggcgcgatctacatcgccgacgcagccatgtatctg
atggcccataagccggatctcggcatcaaggacccctacgaactgaccgaggatcaatac
aaggccgccctcgatctgctgcgcggccagcgcaagctggtctcccgctattggcacgac
gcgatgatccagatcgacgacttcaagaacgagggcgtcgtcgcctccggctcctggcct
ttccaggtgaacctgctgcaggccgacaaacagaagatcgcctccaccttcccggaggaa
ggcgtcaccggctgggccgacaccaccatgctgcacgccgacagcgaacacccgaattgt
gcctatatgtggatggaacattcgctgcaggccaaagtccagggcgacgccgccgcctgg
ttcggcgccgtgccctcggttcccgctgcctgcaagggcaacgaactgatgggggaaacc
ggctgcgccaccaacggcttcgatcacttcgacaagatcaagttctggaagacccctgtc
gccaaatgcgcgacgcagggcgaatgcgtgccgtaccatcgctgggtgtcggattatatc
ggcgtgatcggcgggcggtaa
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