Rhizobium etli CIAT 652: RHECIAT_CH0004068
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Entry
RHECIAT_CH0004068 CDS
T00720
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase protein
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rec
Rhizobium etli CIAT 652
Pathway
rec00300
Lysine biosynthesis
rec00470
D-Amino acid metabolism
rec01100
Metabolic pathways
rec01110
Biosynthesis of secondary metabolites
rec01120
Microbial metabolism in diverse environments
rec01230
Biosynthesis of amino acids
Module
rec_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rec00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RHECIAT_CH0004068 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RHECIAT_CH0004068 (lysA)
Enzymes [BR:
rec01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
RHECIAT_CH0004068 (lysA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ACE92998
UniProt:
B3PPC3
LinkDB
All DBs
Position
4132379..4133647
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AA seq
422 aa
AA seq
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MNHFEYRDGILHAENVPVPEIAKAVGTPFYVYSTATLERHYRVFSEAFADMDSMVCYAMK
ANSNQAVLKTLGRLGAGIDVVSEGELRRALAADIPASRIMFSGVGKTPSEMDFALEAGIY
CFNVESEPELEILNQRAVSAGKKAPVSFRINPDVDAKTHSKISTGKKENKFGISWERARA
IYAHAAKLPGIEVTGIDMHIGSQITELQPFDDAFKLLRDLVATLRADGHTIDHVDIGGGL
GVPYKDDNNPPPLPDAYAAIVKNQLRDLNCKVITEPGRLIVGNAGILVTEVLYVKDGGEK
TFVIVDGAMNDLIRPTLYEAYHEIRPVTISAANAPRIRADVVGPVCETGDYLALDREMAM
PKPGDLLAVSTAGAYGAVQAGTYNSRLLVPEVLVKGGDFHAIRPRRTYAELISLDSVPAW
LD
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccatttcgagtaccgcgacggcatccttcacgccgagaacgttcccgttcccgag
atcgccaaggcggtcggtacgccgttctacgtctattccaccgcgaccctggaacgccat
taccgggtcttctcggaagccttcgccgatatggactcgatggtctgctacgcgatgaag
gcgaattcgaaccaggcggtgctgaagacgctgggtcgcctcggcgccggcatcgacgtc
gtctcggaaggggaactgcgccgcgcgctcgcagccgacattccggcaagccgcatcatg
ttttcaggcgtcggcaagaccccgtccgagatggatttcgcgctcgaggccggcatctac
tgcttcaacgtcgaatccgaaccagagcttgaaatcctcaaccagcgcgccgtcagcgcc
ggaaagaaggcccccgtctccttccgcatcaacccggatgtcgacgccaagacgcattcg
aagatctcgaccggcaagaaggaaaacaagttcggcatctcctgggagcgcgcccgcgcg
atctatgcccatgccgccaagctgcccggcatcgaggtcaccggcatcgacatgcatatc
ggcagccagatcaccgagttgcagcctttcgacgacgctttcaagctgctgcgcgacctt
gtcgcgacgctccgcgccgatggccatacgatcgatcacgtcgacatcggcggcggcctc
ggggtcccctataaggacgacaacaatccgccgccgctgccggatgcctatgcggcgatc
gtcaagaaccagctgcgcgatctgaactgcaaggtcatcaccgagcccggccgcctgatc
gtcggcaatgccggtattctggtgaccgaggtgctctatgtgaaggacggcggcgaaaag
accttcgtcatcgtcgacggcgcgatgaatgatctcatccgcccgaccctctacgaggcc
tatcacgaaatccgcccggtgacgatttcggcggcgaacgcgccgcgcatccgcgccgac
gtcgtcggccccgtctgcgagaccggcgactatctggcgctcgatcgcgaaatggcgatg
ccgaagcccggtgatctgctggccgtcagcacggccggcgcctatggcgccgtgcaggcc
ggcacctataacagccgcctgctggtccccgaagtcctggtcaagggcggcgatttccat
gcgatacggccgcgcagaacctatgccgagctgatcagcctcgattcggttccggcctgg
ctcgactga
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