Rhizobium etli CIAT 652: RHECIAT_CH0004416
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Entry
RHECIAT_CH0004416 CDS
T00720
Symbol
thdF
Name
(GenBank) GTP-binding protein in thiophene and furan oxidation
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
rec
Rhizobium etli CIAT 652
Brite
KEGG Orthology (KO) [BR:
rec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rec03016
]
RHECIAT_CH0004416 (thdF)
Transfer RNA biogenesis [BR:
rec03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
RHECIAT_CH0004416 (thdF)
Prokaryotic type
Methyltransferases
RHECIAT_CH0004416 (thdF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
AAA_28
AAA_18
RsgA_GTPase
Ras
Roc
Motif
Other DBs
NCBI-ProteinID:
ACE93343
UniProt:
B3PS53
LinkDB
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Position
complement(4508938..4510257)
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AA seq
439 aa
AA seq
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MAMLNDTIYALSSGAPPSGVSVIRVSGTLTRDILFQLVGSVPAARTASYRTIRTRYDQPV
DSGLVLFFPGPNSFTGEDAAELQIHGSKAVLAALFRELGDIPGVRMAMEGEFSRRAFENG
KLDLVEVEGLADLIGAETEMQRRLAVEQSAGGVSAIYDSWAERLTRARALIEAELDFPDE
DDVPGSVSDMVWADMARLRHDIALHLEAASAGEIIRDGFKVVIAGAPNAGKSSLMNALAK
REVAIVTDIAGTTRDVLHVDLDIDGYLVKLYDTAGLREAEDRVEIEGVRRARVALRDADL
VLLLVDMSNPIIPADLEQALPHVTVGTKKDLIETASDRYDLQISTTTGEGLPELRDLIGR
VVKERYGGQSLAIPSRQRHKDSLAKCLAALDAAISQGSANLELRTEQLRLAAEYLGRITG
RVDVEQLLDVIFSEFCIGK
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggccatgctgaatgacactatctatgcgctctcaagcggtgctccgccttcgggtgtg
tcagtcattcgcgtcagcggaacgctgacgagagatatcctgttccagctggtcgggtcc
gtgcccgccgctcgaacggcttcttaccgaacgattcgcactcgttacgatcagccggtc
gatagcggtttggtcctgttttttcccggccccaattccttcaccggcgaggatgctgcc
gaattgcagatccatggcagcaaagcggtgctggcggcactgtttcgtgaacttggcgat
attccaggcgtgcgcatggcgatggaaggcgagttttcgcgacgcgccttcgaaaacggc
aagctcgatcttgtcgaagtcgaggggctcgccgatctcatcggcgccgaaaccgaaatg
cagcgccgtctcgccgtcgaacagagcgccggcggcgtctcggcaatttacgattcgtgg
gcggaacgcttaacccgcgcgcgggcgctgatcgaggcggagctcgactttcctgacgag
gacgatgtcccaggttccgtgtcggacatggtttgggccgacatggcgcggctgcgtcac
gacatcgcgctgcatctggaagccgcctcggccggcgagatcatcagggatggcttcaag
gtggtgatcgccggcgccccgaatgccgggaaatcgagcctgatgaatgctctggccaag
cgtgaggtcgccatcgtcaccgatattgccggcaccacacgcgatgtcctgcacgtcgat
ctcgatattgacggctatctggtcaaactctatgacacggccggtctgcgtgaggcggag
gaccgggtggagatagagggggtgcgccgcgcgcgtgttgcactccgcgatgccgatctt
gtgctgctgctggtcgatatgagcaatcccattatccccgccgacttggagcaggctttg
ccgcatgttacggtcggaacgaagaaggatttgatcgagactgcttccgatcgatatgat
ctgcagatttcgacgacgaccggcgaaggtctgccggaattgcgggatttgatcggccgt
gtcgtcaaagagcgttatggtggccagtctctggcgatcccgagccggcagcgacataag
gattcgctggcgaaatgtttggcggccctcgatgctgcaatctcgcagggaagcgcgaat
ttggagctgcgcacggaacagcttcgccttgcggccgaatatttgggtagaattaccggg
cgagtggacgtcgagcagctgctcgacgtgattttctcggagttttgtattggcaaatga
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