Rhizobium etli CIAT 652: RHECIAT_PA0000043
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Entry
RHECIAT_PA0000043 CDS
T00720
Name
(GenBank) probable oligopeptide ABC transporter, substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rec
Rhizobium etli CIAT 652
Pathway
rec02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rec00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RHECIAT_PA0000043
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rec02000
]
RHECIAT_PA0000043
Transporters [BR:
rec02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RHECIAT_PA0000043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
GH113
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
ACE93389
UniProt:
B3Q133
LinkDB
All DBs
Position
pA:complement(54578..56485)
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AA seq
635 aa
AA seq
DB search
MVTRRTFLGGLVGAAIAPAVLRAEQAGEPDFLKERLAAGSLPGMAERIPARPRIVNLKEM
GLEPGTYGGTVRTIIGSQRDIRFMTIYGYSRLVGYDKHLQFQPDILADFRSEDDTVFTFT
LREGHKWSDGEPFTADDFRYWWEDVILNDKLTPGGGALELRPHGSLPRFEMLDPLTVRYT
WEKPNPMFLPTLAGPQPLVIFGPAHYLKQFHKKFQPDEAKMEQMMQTSRVKKWQDLHIKM
ARSYRPENPNLPTLDPWRNTTALPADQFVFERNPFFHRVDETGRQLPYLDRFILNVSSSS
IIAAKAGAGEADLQATGIDFNDYTFLKEAEKRFPVKVNLWKVARGSRITLLPNLNCADEV
WRGLFRDVRLRRALSLAIDRHEINMVAFYGLGTPSADTVLPDSPLFKQEYADAFVKFDPD
EANRLLDELGLTKRGGDGIRLLPDGRRAEITVETAGESNLDTDVLELVHDHWANIGLALY
TRTSQRDVFRNRAMSGTIMMSIWYGLDNGVPTADMSPSGLAPTLDDQLQWPLWGMHYLSA
GQEGVAPDLPEAAELIDLLNQWGSTAKFEERQAIWHRMLSLYTQQVFSIGLINSTLQPIL
RAAKLQNLPEKALYGFDPTSYLGIYMPDAFWYKEA
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggtgacgcgtcgcacctttttgggcggccttgtcggcgccgcgatcgccccggcggtg
cttcgcgccgagcaggccggcgagccggatttcctcaaggagcggctggccgcaggcagc
ctgcctggcatggccgagcgcattcccgcccgtccgcgcatcgtcaatctgaaggagatg
gggctcgaacccgggacctatggcggcacggtgcgcaccatcatcggcagccagcgcgac
atccgcttcatgacgatctacggctattcccgcctggtcggctacgacaagcacctgcag
ttccagcctgacatactcgccgacttccgctccgaggacgacacggtcttcaccttcacg
ctgcgcgaagggcataaatggtccgatggcgagccgttcaccgccgacgatttccgctac
tggtgggaagacgtcatcctgaacgacaagctgacgccgggcggcggtgcgctcgagctt
cgtccgcatggcagcctgccgcgcttcgagatgctcgatccgttgacggtgcgctatacg
tgggaaaaacccaatccgatgttcctgccgacgctcgcaggtccgcagccgctcgtcatc
ttcggtccggcgcattacctcaagcagttccataagaagttccagccggacgaagcgaag
atggaacagatgatgcagacctcccgcgtcaagaagtggcaggatctgcacatcaagatg
gcgcgctcctaccggccggaaaatcccaacctgccgacgctcgatccctggcgcaacacg
acggcgctgccagccgaccagttcgtcttcgagcgcaacccgttcttccaccgcgtcgac
gaaaccggcaggcagctgccctatctcgaccgtttcatcctcaacgtctcctcctcgtcg
atcatcgccgccaaggcgggtgccggcgaagccgacctgcaggcgaccggcatcgatttc
aacgactacactttcctgaaggaggccgagaagcgcttcccggtgaaggtcaatctctgg
aaggtggcccgcggctcgcgcatcacgctgctgccgaacctcaactgcgccgacgaggtg
tggcgcggcctgttccgcgacgtgcgcctgcgccgggcgctgtcgctggcgatcgaccgg
catgaaatcaacatggtcgccttttacggcttggggacgccgagcgccgataccgtgctg
cccgacagcccgctgttcaagcaggaatatgccgacgccttcgtcaagttcgatcccgac
gaggccaaccgcctgctcgacgaactcggtctgaccaagcgcggcggcgacggcatcagg
ctgctgccggacggtcggcgcgccgagatcaccgtcgagaccgccggtgaaagcaatctc
gataccgacgtgctggaactggtgcacgatcactgggccaatatcggcctggcgctctat
acccgcacctcgcagcgcgacgtcttccgcaaccgcgccatgagcggcacgatcatgatg
tcgatctggtacggcctggacaatggcgtgcctacggccgacatgtcgccgtccgggctc
gccccgacgctcgacgaccagctgcaatggccgctctggggcatgcactatctctccgcc
ggccaggagggtgtggcgcccgacctgccggaggcggccgaactgatcgatctgctcaat
caatggggctcgacggcgaagttcgaggagcgccaggcgatctggcacaggatgctgtcg
ctctatacgcagcaggtgttttcgatcggcctgatcaacagcacgctgcagccgatcctt
cgcgccgccaagctgcagaacctgcccgagaaagccctctacggcttcgatcccacctcc
tatctcggcatctacatgccggatgcattctggtacaaggaggcctga
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