Rhizobium etli CIAT 652: RHECIAT_PA0000064
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Entry
RHECIAT_PA0000064 CDS
T00720
Symbol
pcaQ
Name
(GenBank) transcriptional regulator protein, LysR family
KO
K02623
LysR family transcriptional regulator, pca operon transcriptional activator
Organism
rec
Rhizobium etli CIAT 652
Brite
KEGG Orthology (KO) [BR:
rec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rec03000
]
RHECIAT_PA0000064 (pcaQ)
Transcription factors [BR:
rec03000
]
Prokaryotic type
Helix-turn-helix
LysR family
RHECIAT_PA0000064 (pcaQ)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
HTH_23
MarR
Mga
Fe_dep_repress
OpuAC
Motif
Other DBs
NCBI-ProteinID:
ACE93410
UniProt:
B3Q154
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Position
pA:78200..79117
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AA seq
305 aa
AA seq
DB search
MIDSRIKFRHLQTFVEVARQKSVMKAAELLHVSQPAVTKTIRELEQVLGVDVFERDGRGI
KITRYGEVFLRHAGAALTALRQGLDSVSQEQFAEAPPIRIGALPTVSSRIMPRAMELFLQ
EKTWSRVKIVTGENAVLLEELRVGDLDLVVGRLAGAEKMAGFSFEHLYSEQVVFAVRAGH
PLLDGRQSLFSALGDYTVLMPTRGSIIRPVVENFLIANGVSSLPNQIETVSDAFGRAFLR
ASDAIWIISNGVVAGDVADGRLALLPIETGETRGPVGLTMRADAVPSAPQSILMQTIREA
ARELS
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacagccgtatcaagtttcgccatctgcagacctttgtcgaggtggcgcggcag
aagagcgtgatgaaggcggcggaattgctgcatgtcagccagccggcggtgacgaagacg
atccgcgaactggaacaggtgctgggcgtcgacgtcttcgagcgcgacggccgcggcatc
aagatcacccgctacggcgaggttttcctgcgccatgccggagcggcgctgacggcactg
cgccagggtctcgattccgtgtcgcaggaacagttcgccgaagcgccgccgatccgcatc
ggcgccctgccgactgtctcgtcgcgtatcatgccgcgggcgatggagctcttcctccag
gagaagacgtggagccgagtgaagatcgtcaccggcgagaacgcggtgctgttggaagag
ctgcgcgtcggcgacctcgatctggtcgtcgggcgcctagccggcgccgaaaagatggcg
ggcttttccttcgaacacctttattccgaacaggtcgtgtttgccgtgcgcgccggtcat
ccgctgcttgacggccggcagtcgctgttctcagccttaggcgactatacggtgctgatg
ccaacgcgcggttcgatcatccggccggttgtcgaaaatttcctcatcgccaacggcgtc
tccagcctgccgaaccagatcgagacggtgtcggatgccttcggccgcgccttccttagg
gcaagcgacgcgatctggatcatttccaacggcgtggtggccggcgatgtcgccgatgga
cggctggcgcttctgccgatcgagaccggcgagaccagggggccagtcgggctgacgatg
cgggccgatgccgtgccgtcggcgccgcaatcgatcctgatgcagacaatccgggaagcg
gcgcgggagctatcctga
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