Rhizobium etli CIAT 652: RHECIAT_PA0000162
Help
Entry
RHECIAT_PA0000162 CDS
T00720
Name
(GenBank) probable DNA topoisomerase I protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rec
Rhizobium etli CIAT 652
Brite
KEGG Orthology (KO) [BR:
rec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rec03032
]
RHECIAT_PA0000162
03400 DNA repair and recombination proteins [BR:
rec03400
]
RHECIAT_PA0000162
Enzymes [BR:
rec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
RHECIAT_PA0000162
DNA replication proteins [BR:
rec03032
]
Prokaryotic type
DNA Topoisomerases
RHECIAT_PA0000162
DNA repair and recombination proteins [BR:
rec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RHECIAT_PA0000162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
ACT
Motif
Other DBs
NCBI-ProteinID:
ACE93506
UniProt:
B3Q1F0
LinkDB
All DBs
Position
pA:182924..183931
Genome browser
AA seq
335 aa
AA seq
DB search
MNAEAITELGLIYVSDTEPGIRRRRKGKGFSYVMPDGTTLSDELQRARIGALGLPPAYEN
VWICLYENGHLQATGIDARGRKQYRYHKDWQSFRSAGKFHQLIEFGRALPKIRRTVLRHL
DTGAEDVNGVLAALTTLLDEAHLRVGNQAYVRENGTYGATTLLKRHLKIVDGRIELKFRA
KGGKRVQRSLKHPRLQKILEEIADLPGRQLFVWKDESGALKPVDSGRLNAYLAEISGTPI
SAKTFRTWAGSLAAFGAAREKIVGGGRPTVKEMSEAAAEALHNTPAISRSSYIHPAIIAL
AGNDHPLIEGGNEPLRGLRAEENRLLDFLTREIEE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccgaagccatcaccgaacttggcctcatctatgtcagcgataccgagccgggc
atccgcaggcgcaggaaaggcaagggcttcagctatgtgatgcctgacggtacgacgctt
tcggacgagctgcagcgggcccgcatcggcgcactcggcctgccgccggcctatgagaat
gtctggatctgtctctacgagaacggccatctccaggcgaccgggatcgatgcgcgcgga
cgcaagcaatatcgctatcacaaggactggcaatccttccgcagcgccggaaagtttcac
cagctgatcgaattcggccgggcattgccgaagatccgccgcaccgtgctgcgccatctc
gacaccggtgccgaggatgtcaacggcgtgctggcggcattgacgacgctgctcgacgag
gcgcatctgcgggtcggcaaccaggcctatgtcagggaaaacggcacctatggcgcaacg
acgctgttaaagcggcacctgaagatcgtcgacgggcggatcgagctcaaattccgggcc
aagggcggcaagcgcgtgcagcgcagcctcaagcatcccaggctgcagaagatcctcgag
gagatcgccgatctgcccggccgtcagctcttcgtctggaaggatgagagcggcgcgctg
aaacccgttgattccggccggctgaatgcctatctggcggagatatcgggcactccgatt
tccgccaagacgttccgcacctgggccggttcgctggccgccttcggtgcggcccgggaa
aaaattgtcggcggcggccggccgaccgtcaaggaaatgtcggaggctgcggccgaagcg
ctgcacaatacgccggcaatttcacgctcgagctacatccatccggcgatcatcgcgctc
gccggcaacgaccatccactgatcgagggcggcaacgagccgttacggggcttgcgggcg
gaagaaaacaggctacttgatttcctgacacgcgagatcgaggaatga
DBGET
integrated database retrieval system
