Rhizobium etli CIAT 652: RHECIAT_PB0000020
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Entry
RHECIAT_PB0000020 CDS
T00720
Name
(GenBank) probable ATP-dependent DNA helicase protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rec
Rhizobium etli CIAT 652
Pathway
rec03420
Nucleotide excision repair
rec03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RHECIAT_PB0000020
03430 Mismatch repair
RHECIAT_PB0000020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rec03400
]
RHECIAT_PB0000020
Enzymes [BR:
rec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RHECIAT_PB0000020
DNA repair and recombination proteins [BR:
rec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RHECIAT_PB0000020
MMR (mismatch excision repair)
Other MMR factors
RHECIAT_PB0000020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_11
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ACE93745
UniProt:
B3Q239
LinkDB
All DBs
Position
pB:complement(25176..26960)
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AA seq
594 aa
AA seq
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MISLTEEQQSAVEVEKHLLLAACPGSGKTRVILAKLLGLADTVEKSPRFIGCITYTNAAV
DEIESRLRVYGTNTSTEKCDVSTIHSFCLQHILRPYSWLVAELPPTFKVLTREIADFEQI
VEAVEDHFGRATMARTFDDYESLRVDVHGEPAGDGFEHGIVTRDSAILYWEFVRARGFLD
FAMILFYSLRILREHPFVARGIAARFEWLLVDEFQDTTDVQLAIFRELHRHLTTKFFMVG
DHNQSIMSFAGARPDLAQEFATEIGAELDYSLTANFRSAPGVVNTAHTLIATNPRMHSEG
KAKDFDAKVTYVHVSQPLNAITEHFLPMLQDEGIELGNAAVLAPWWTHLIPVARALREFD
IPVFGPGARPYRRRRLLAGLAEQLGACAESEHFLGLPGVEKALFRLIGDITGATRFDVFS
YAGRRTALALIYRARACATAHPGGKAWLYQIAAEIAEQLYTDGWVPAPPTALLEASADEM
VRDMRANRVDLENLAISDMGLFANPEKALKLITMHNSKGREFDAVALISMNYGHLPHFSS
TTQEQYDEARRLFYVGITRAKKVLLVASDFSDRRNRPCPFITEAGLMLGGSEDW
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgatctcgctgaccgaggagcagcagtcggccgtcgaggtggaaaaacacctgctgctt
gccgcctgccccggcagcggcaagacccgcgtgatcctcgcaaagcttcttgggcttgcc
gataccgtcgagaaatccccccgatttatcggttgcataacctacacaaatgcggccgtg
gatgagattgaatcgcgcctgcgggtctacggaacgaacacgagcactgaaaagtgcgat
gtttcaacgatccactcgttctgccttcaacacattctgaggccttacagctggctcgtt
gctgagttgccgccaactttcaaggttttgacacgggaaatcgcggatttcgagcaaatc
gtagaggcggtagaggaccacttcggtcgcgccaccatggcaagaaccttcgacgattac
gaatctctgcgagtcgacgtccatggcgagccggcaggtgacggttttgagcatggtatc
gtgacgcgcgattccgccattttgtactgggaattcgtccgcgcgcgcggctttcttgat
ttcgcgatgatccttttttactcgctccgtattctgcgcgaacatccatttgttgccaga
ggaatcgcggcacgctttgaatggctcttggtcgacgagtttcaagacactaccgacgtt
cagctggcgatttttcgcgagctgcaccgccacctgaccacgaaattctttatggtcggc
gaccacaaccagtcaatcatgagctttgccggtgcccgccccgatttggcgcaagaattt
gcgaccgagattggcgccgagctagactattcgctgactgcaaattttcggtccgcgccc
ggcgtcgtcaatacagcgcacaccttgatcgcgaccaatcctcgcatgcattcggaagga
aaagcgaaggattttgatgccaaggttacctacgttcatgtctcccaacccctcaacgca
atcaccgagcattttctgcctatgctgcaggacgaaggtatcgagctcggaaacgcggcc
gttctcgcgccgtggtggacgcacctcatacccgtagcgcgtgcgttaagggagtttgat
atccctgttttcgggccgggtgcgaggccatatagacgacgacgcctgctcgccggcttg
gccgaacaacttggggcctgtgccgagtcggagcattttctcggccttccaggcgttgag
aaagcgctcttcaggcttataggcgacatcacgggcgcgacgcggtttgacgtcttcagc
tatgcgggacgtcggaccgcactggcattgatctatcgcgcacgagcttgcgcgacggct
catcctggtggaaaggcttggctttatcaaatcgcggctgaaatcgcggagcagctgtat
actgacggctgggtcccggccccgccgacagcgctccttgaagcgtcagcggatgagatg
gttcgggacatgcgggcaaatcgcgtggaccttgaaaacctcgctatttctgacatgggg
ctgtttgccaacccggaaaaagctctcaagttgattacgatgcacaactctaagggtcgc
gaattcgatgcggtcgcattgatcagcatgaactacggccaccttcctcatttttcgagc
accacccaagagcagtacgatgaagcgcggcgactgttctatgtgggcatcactcgtgca
aaaaaagttttgcttgtcgcatccgatttctccgacaggcgtaatcggccctgcccgttc
atcaccgaagcagggctgatgttggggggctcggaagattggtaa
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