Rhizobium etli CIAT 652: RHECIAT_PB0000232
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Entry
RHECIAT_PB0000232 CDS
T00720
Symbol
syrM
Name
(GenBank) transcriptional regulator protein SyrM
KO
K25882
LysR family transcriptional regulator, transcriptional activator of nodD3 and syrA
Organism
rec
Rhizobium etli CIAT 652
Brite
KEGG Orthology (KO) [BR:
rec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rec03000
]
RHECIAT_PB0000232 (syrM)
Transcription factors [BR:
rec03000
]
Prokaryotic type
Helix-turn-helix
LysR family
RHECIAT_PB0000232 (syrM)
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
ACE93941
UniProt:
B3Q2N5
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Position
pB:249088..250098
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AA seq
336 aa
AA seq
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MNVMKRYVEKEVTDQLAYRRKMLQDWRGERLTGHQINLASIDLNLLVALEALLEYRNVTH
AGQHIGRSQPAMSRALGRLRGMFNDDLLVRSSTGLIPTPQGEHLAQRLPSALRTIREMVT
SRSVISKEWGRGATLAIPDHQALAVLPRLLPWLRERAPHLDTLACLPFDRAVRGLEQGDI
DLAVGHIDVQLPGYFRRSLYTDRFACLLRHDHPALAQEWTIDNFATLRHAAISTDSPDHF
GPIYDHLPNLREDRSPILFSSVLTAAVVASGTDLVLLVPRRVATQVSAMLPLRVVDPPLE
PAPYKVMLIWHERCHHDPQHKWLRKEVAAALETGAD
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcatgaaacgctatgtagaaaaagaggtgacggatcaactcgcttataggcga
aagatgttgcaagattggagaggagagcgcctcactggacaccagataaacttggcatca
atagacctcaacctcctggtcgcgctcgaggctctgctcgaataccggaacgtgacgcac
gcgggccagcacatcgggcggagtcaaccggcgatgagccgggcactgggaaggctgcgc
ggcatgttcaatgatgacctgctggtgcggtcttcaacgggtttgatcccaacgccgcaa
ggcgaacacttggctcaaaggctgccgtcggcactgcgtacgatccgagagatggtgaca
agccgcagcgtaatctcaaaagaatgggggaggggggcaacgctggcgatccccgatcat
caagctttggctgtactaccgcgcctcctgccgtggttacgcgagcgtgcccctcatctc
gacacactcgcctgtttgccgtttgatcgtgccgtgcgggggcttgagcaaggtgatatt
gatttggccgttgggcatattgacgtgcaactgcctggctattttcggcgcagtctctat
acagaccgcttcgcgtgtttgttgcgccacgaccatcccgcgctggcgcaggaatggacg
atcgacaacttcgcgaccttgcgtcacgctgccatcagtacggactcccccgaccatttc
ggcccgatctacgaccacttgcccaacctgcgagaggatcgtagtcccatacttttttcc
agcgttctcacggcagcggtggtggcttcggggacggatttggtattgctcgtcccgcgc
cgcgttgcgacccaagtttccgcgatgctgccgcttagggttgttgatccacccctcgag
ccggcaccgtacaaggtcatgctcatctggcacgagcggtgccatcacgacccgcagcat
aaatggctgcgcaaggaggtcgccgcagcgttggagacgggagcagactga
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