Rhizobium etli CIAT 652: RHECIAT_PB0000272
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Entry
RHECIAT_PB0000272 CDS
T00720
Symbol
nifA
Name
(GenBank) nitrogen fixation transcriptional regulator protein, NifA
KO
K02584
Nif-specific regulatory protein
Organism
rec
Rhizobium etli CIAT 652
Pathway
rec02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rec00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RHECIAT_PB0000272 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rec03000
]
RHECIAT_PB0000272 (nifA)
Transcription factors [BR:
rec03000
]
Prokaryotic type
Helix-turn-helix
Other families
RHECIAT_PB0000272 (nifA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
HTH_8
AAA_5
AAA_2
Mg_chelatase
AAA
MCM
AAA_3
AAA_16
BrxC_BrxD
Motif
Other DBs
NCBI-ProteinID:
ACE93980
UniProt:
B3Q2S4
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All DBs
Position
pB:304846..306534
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AA seq
562 aa
AA seq
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MRQAGTQRSGIYEISKVLTAPARLEITLANVVNVLSSFLQIRCGAIVVLDAEGQPEIAAT
GDIPPSSQSAARGVIPKAVIDHIATTGMPLIVKDVSKSELFQAEPQPPWSSGTVPISFIG
VPVKADNKILGTISIDRVRNDAAPFPADEDVRFLTMVANLVSRTIRLHRFLNLEGRRPIG
EQERPEKPIIAQRGAPGRHPPVKIDGIIGDSPALQQVVETVSVVARTNSTVLLRGESGTG
KEFFAQAIHELSPRKNKPFVKLNCAALPEGVLESELFGHEKGAFTGAIAQRAGRFELANG
GTLLLDEIGEISPAFQAKLLRVLQEGELERVGGTKTLAVDVRLICATNKNLEMAVANAEF
RADLYYRISVVPIVLPPLRERPGDIPRLANALLDRFNKENQRELTFSSSAIEVMSQCYFP
GNVRELENCVRRTATLARSSSIVSSDFACKNSQCLSSLLWKTDGSPGGITVDGHARSNVM
PTSSPRSGGSIGASDEVSSVKACDPHGSGCPAMESRLTQRDRLIEAMEKAGWVQAKAARI
LGLTPRQVGYALRQHRIEVKKL
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcgccaagcgggcacgcagcgcagcggaatctacgagatatcaaaggtactgactgcc
cccgcccggctagagattacgcttgccaacgtcgtgaacgtcctctcttcctttctgcag
attcgatgcggagcaatcgttgttctagacgctgaaggtcagcccgagattgccgcaact
ggcgacatccccccatcctctcaatcagccgctcgaggcgttatacctaaggccgtaatc
gaccatatcgcgacgaccggtatgcccttaatcgtaaaggatgtcagcaagtccgaatta
tttcaggctgagccgcaaccgccttggagcagcggcaccgtcccaatttcttttattggc
gttccggtaaaagccgataataaaatacttggcacaatatcgatcgatcgcgtcaggaac
gacgccgcccccttccccgccgacgaggacgttcgctttctgaccatggtcgccaatctg
gtcagtcggacgatcaggcttcatcgtttcctgaacctggagggtcggcgacctatcggc
gaacaagagagaccggagaagccgatcatcgcgcaaaggggcgcgccgggccgacatcca
cccgtcaaaatcgacgggattatcggggatagcccggctctccagcaggtggttgaaacc
gtctcggtggtggcgaggacgaattccaccgtgcttctgcggggcgaaagcggcaccggc
aaggaattttttgcacaggcgatccatgaactttcccctcgtaaaaacaagccgttcgtc
aaattgaactgcgccgcgctgcccgaaggcgtcctggaatcggagctgtttgggcatgaa
aaaggggctttcaccggggccatcgcgcagcgcgccggacgcttcgaactggcaaatggc
ggaacgcttctacttgacgagattggcgagatttcgcccgcctttcaagccaaactgctg
cgcgtcctgcaggaaggcgaactggagagggtgggcggaaccaagacgcttgcggtcgac
gtccggctcatatgcgccacgaataagaacctcgagatggctgttgcaaacgccgaattc
agggccgacctgtattaccgcatcagcgtagttccaattgtcctgccgccgcttcgagag
cgacccggcgatattccacgccttgcgaacgctcttcttgaccgattcaacaaggagaac
caacgcgagctgacgttttcgtcgtcggcgatcgaggtgatgtcgcaatgctatttccca
ggtaacgtccgggaactcgaaaactgcgtgcgaaggactgccacccttgcgcgttcaagc
tcgatcgtttcgtctgattttgcctgcaagaacagccagtgcctttcgtcgctcctctgg
aaaaccgacgggtcgcccggcggcatcaccgtcgatgggcatgcccggagcaatgtgatg
ccgacttcatcgccgcgctcgggcgggagcatcggtgcgtcggacgaggtatcttccgtc
aaggcttgtgatccgcacggttccggttgtcccgcaatggagtcgcgcctcacgcaacgg
gaccggttgatcgaggcgatggaaaaggccggatgggttcaggccaaagcggctcgtatt
ctcggccttacgcctcgtcaggtcggctatgctctacgccagcatcgcatcgaggtgaaa
aagctttaa
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