Rhizobium etli CIAT 652: RHECIAT_PC0000349
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Entry
RHECIAT_PC0000349 CDS
T00720
Symbol
lpsB2
Name
(GenBank) dTDP-glucose 4,6-dehydratase protein
KO
K24300
UDP-N-acetylglucosamine 4,6-dehydratase [EC:
4.2.1.135
]
Organism
rec
Rhizobium etli CIAT 652
Pathway
rec00541
Biosynthesis of various nucleotide sugars
rec00552
Teichoic acid biosynthesis
rec01100
Metabolic pathways
rec01250
Biosynthesis of nucleotide sugars
Module
rec_M01009
UDP-QuiNAc biosynthesis, UDP-GlcNAc => UDP-QuiNAc
Brite
KEGG Orthology (KO) [BR:
rec00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
RHECIAT_PC0000349 (lpsB2)
00552 Teichoic acid biosynthesis
RHECIAT_PC0000349 (lpsB2)
Enzymes [BR:
rec01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.135 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining)
RHECIAT_PC0000349 (lpsB2)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
CoA_binding_3
3Beta_HSD
C2185-like_N
adh_short
KR
CoA_binding
PglD_N
adh_short_C2
NAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
ACE94429
LinkDB
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Position
pC:complement(375283..377229)
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AA seq
648 aa
AA seq
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MPMQALVAPLLAMPRPAKRALALLVDSSFCVLTIWLAYCFRLNEWTVLTGVQWLPVFVSL
CMALPIFIVMGMYRAIFRYAGLAAFIAVLKAIAIYGVAFMTIFTALSVPGVPRTVGILQP
FLLLIAIGLSRLGIRYWLGDTYQRILHQNTLAKVLIYGAGNAGRQLAGALTNSAELNVVG
YLDDDPRLKGGIMGGLPIYDPSDLPVLAEALGVHNVLLALPSASRQRRNEILERIRKARV
NVRTLPDLTALAQGRVAVSDIRELEIEDLLGREAVAPRQELLDKAMRKKVVMVTGAGGSI
GGELCRQILRNAPSSLILIDQNEFALYNIHAELLKLAELYKQESLQIVPILCSVRDQDRM
EHIMQSWRPQTLYHAAAYKHVPLVEHNAVEGIKNNVMGTLITARAANKCGVLNFVLISTD
KAVRPTNVMGASKRLAEMVLQALAAEPAVDRVRTNFSMVRFGNVLGSSGSVVPLFRQQIK
DGGPVTLTHPKITRYFMTISEASQLVIQAGAMAEGGDVFLLDMGEPVRIADLARKMVELS
GLAVRDEDNPEGDIELSVTGLRPGEKLYEELLIGDNPETTEHPRIMKAREDFLFWPELSK
KLSSLNAALDRNDMVAARATLAELVSGYSSTGEVSDLAFTGAETITAA
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
gtgccgatgcaggcgctcgtcgcccctctgctggcgatgccgcgtcctgccaaacgcgcg
ctcgccttgctggtggattcgagcttttgcgtcctgacgatctggctggcttattgcttc
cgactgaacgaatggacggtgctgaccggcgtgcagtggttgccggtcttcgtctccctg
tgcatggcccttcctatcttcatcgtcatgggcatgtatcgggcaatcttccgctacgcc
ggccttgccgctttcatcgcggttttgaaggctattgcgatctacggcgtcgccttcatg
acgatttttactgcgctgagcgtccctggcgttccgagaacggtcggtattcttcagcct
ttcctgctgctgattgcgatcggcctgtcgcgactgggcatccgctattggctcggcgat
acctatcagcgtatccttcaccagaatacgctcgccaaggtgctgatctacggggcaggg
aatgccggccgacaattggccggcgctctgacgaacagcgccgaactcaatgtcgtcggt
tacctggacgatgatccgcgtcttaagggcggcatcatgggcggcttgccgatctacgac
ccgtcggatcttccggtgctcgccgaagctcttggcgtgcacaacgtgcttcttgctttg
ccatccgcatcgcggcagcggcgcaatgaaatcctcgagcgcattcgcaaagccagggtg
aatgttcggacattgccggacctcacggcgcttgctcagggccgtgtcgccgtctccgac
attcgcgagctggagatcgaagatctgctgggcagggaagcggtggcgccgcggcaggaa
ttgctcgacaaggcgatgcgcaaaaaggtggtgatggtcacgggcgctggcggttccatc
ggtggtgaactctgtcggcagattctgcgcaacgcgccttcgagcctcatcctcatcgat
cagaacgagttcgcgctttataatatccacgccgaattgctgaagctggccgaactttac
aagcaggaaagcctgcagatcgttccgatcctttgttccgtccgcgaccaggaccgcatg
gaacatatcatgcagagctggcggccgcagacgctctatcatgccgccgcttacaagcat
gtgcctctcgtcgaacataatgcggtggaaggcatcaagaacaacgtcatggggacgctg
atcaccgcacgcgcggcgaataaatgcggcgtcttgaatttcgtgctgatcagtacggac
aaggccgtgcgtccgacgaacgtgatgggcgccagcaagaggctggcggagatggttctg
caagcgcttgctgcagaaccggccgttgacagagtgcgcacgaatttctccatggtccgg
tttggaaacgtgctcggctcctccggatccgtcgtgccgctgttccggcagcagatcaag
gacggcgggccggttaccttgacgcacccgaaaataacccgctacttcatgaccatttcg
gaggcctcgcagctggtcattcaggcgggcgcgatggccgaaggtggggatgttttcctg
ctcgacatgggcgagcccgtccgcatcgccgatctcgcccgcaagatggtggagctttcg
ggattggccgtccgagacgaggataatcccgaaggggatatcgagctttccgtgaccggc
ctgagacccggcgagaagctttatgaagaactgttgatcggggataatcctgaaacaacc
gaacatcccaggattatgaaggcgcgcgaggatttcctgttctggccggagctttcgaag
aaactcagctcgctcaatgcggcactggatcgaaacgatatggtcgcggcacgtgcgacc
ttggcagaactcgtctccggttattcctcaaccggtgaggtgtcggatcttgccttcacc
ggcgccgaaaccatcacggcagcctga
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