Roseicyclus elongatus: roselon_00366
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Entry
roselon_00366 CDS
T03060
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
red
Roseicyclus elongatus
Pathway
red03030
DNA replication
red03430
Mismatch repair
red03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
red00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
roselon_00366
03430 Mismatch repair
roselon_00366
03440 Homologous recombination
roselon_00366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
red03032
]
roselon_00366
03400 DNA repair and recombination proteins [BR:
red03400
]
roselon_00366
Enzymes [BR:
red01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
roselon_00366
DNA replication proteins [BR:
red03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
roselon_00366
DNA repair and recombination proteins [BR:
red03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
roselon_00366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
Motif
Other DBs
NCBI-ProteinID:
AHM02811
UniProt:
W8S241
LinkDB
All DBs
Position
complement(341577..345107)
Genome browser
AA seq
1176 aa
AA seq
DB search
MADPRFIHLRLHTEYSLLEGAMRVKKLPGMVAEAGMPAVAVTDTNNMFCALEFSETAAKA
GVQPIIGCQIDVDYAPVQPGERPNPPAAIVLLAQHEAGYKNLMKLNSALYLRGDGSLPHV
TLEELARHGEGLICLSGGPEGPVGQFLQAGNTGRARALLERMAAIYSDRLYVELQRHPGE
GGLPEGEARTERGHVELAYELNLPLVATNDVYFPKPEMYEAHDALICIAEGAYIDQSEPR
RRLTPQHHFKTPEEMAALFADLPEALENTVEIARRCAFRARTHPPILPRFADDEVEELRR
QAHEGLHARLAVIPHADTVEAYEERLEFELGIIEGMGFPGYFLIVADFIKWAKDHDIPVG
PGRGSGAGSLVAYALTITDLDPLRYSLLFERFLNPERVSMPDFDIDFCMDRREEVIRYVQ
EHYGRDKVGQIITFGALLSKAAVRDVGRVLQMPFGQVDRLSKMIPVEGVKPVSIAQAIKD
EPRFIEEMRETEQDKRDGRVNPTRRLMDYAEKIEGLLRNASTHAAGVVIGDRPLDELVPL
YRDPRSDMPATQFNMKWVEPAGLVKFDFLGLKTLTVVQNAIDLIHASGRQLHEAPDGSTI
YQPPEGAENQINAIPLDDPATYALYASAKTVAVFQVESSGMMDALRRMKPTCIEDIVALV
ALYRPGPMENIPKYCEVKNGISDRDRLHPLIDHILDETQGIIVYQEQVMQIAQEMAGYSL
GGADLLRRAMGKKIKEAMDAERPKFLEGAAKNGVDEAKALEVWNLLEKFANYGFNKSHAA
AYAVVSYQTAWLKANHPVEFMAAVMNCDIHLTDKLGIYKQEVDRLGIDTVPPCVNRSAAS
FTVKDGKILYALGALKNVGVDAMRLIVEARQTERGEKPFATLFDFARRVDLKRVGKRSLE
MLARAGAFDDLDRNRARVFAALDALTAYSAAIHEQKASNQVSLFGEAGEDLPEPRLPEAS
DWMPNERLANEHQAVGFYFSGHPLDDYMPALKRRGVLTLHEVEQRVQGGAFVTKMAGAVS
VRQERKSQRGNRFAFVSLSDPSGLYEVTVFSDVLEASRQHLETGSNVILQVKAELESDQL
KLLAAAVQPVDDGIAAEAGGLRVFVEDPRGVETVSTLLDRAREDAMRSAKGPIHLCLMAP
DLPGEVEVLLGEDFPVSPQIKGALRSLEGVVTVEEV
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atggccgatccccgattcattcacctcagactgcataccgagtattcgctgctggaaggc
gcgatgcgggtcaagaaactgcccggcatggtggccgaggccggcatgcccgccgtcgcc
gtgaccgacacgaacaacatgttctgcgcgctggaattttccgaaacggcggccaaggcc
ggcgtgcagcccatcatcgggtgccagatcgatgtggattacgccccggttcagcccggc
gaacggcccaacccgcctgccgccatcgtcctgctggcccagcacgaggccggctacaag
aacttgatgaagctgaattcggcgctttacctgcgcggcgatggcagcctgccgcatgtc
acgctcgaggaactggcccggcatggcgaggggctgatctgcctgtctggcgggcccgag
gggccggtgggtcaattcctgcaggcgggcaatacgggacgcgcccgcgcgcttctggaa
cggatggccgcgatctattccgaccgtctttatgtcgagttgcagcgccatccgggcgaa
ggcggcctgcccgagggcgaggcgcggaccgaacgcggccatgtcgagctggcctacgag
ttgaacctgccgctggtcgccaccaacgatgtctatttccccaagcccgagatgtacgag
gcgcatgacgcgctgatctgcatcgccgaaggggcctatatcgaccagtcggaaccgcgc
cgccgcctgaccccgcagcatcatttcaagacgcccgaggagatggccgcgcttttcgcc
gatctgcccgaggcgctggaaaacaccgtcgagatcgcgcggcgctgcgcgtttcgcgca
cgcacgcacccgccgatcctgccgcgcttcgccgatgacgaggtcgaggaattgcgccgt
caggcgcatgagggcctgcatgcccgccttgccgtcatcccccatgcggataccgtcgag
gcgtatgaagaacggcttgaattcgagctgggcatcatcgaggggatgggctttcccggc
tatttcctgatcgtggccgatttcatcaaatgggccaaggatcacgatattcccgtcggg
ccggggcgcggctcgggcgccgggtcgctcgtcgcctatgcactgacgatcaccgatctc
gatccgctgcgctattcgctgctcttcgaacgcttcctgaaccccgaacgcgtgtcgatg
cccgacttcgacatcgacttttgcatggaccgccgcgaagaggtgatccgctacgtccaa
gagcattatggccgcgacaaggtgggccagatcatcaccttcggcgcgcttctgtccaag
gccgccgtgcgcgacgtggggcgcgtgttgcaaatgccgttcgggcaggtcgatcgcctg
tccaaaatgatcccggtcgagggggtgaagcccgtctcgatcgcgcaggccatcaaggat
gagccgcgtttcatcgaggaaatgcgcgagaccgagcaggacaagcgcgatggccgcgtg
aaccccacgcgccgcttgatggattacgccgagaagatcgaaggcctgctgcgcaatgcc
tcgacccacgcagcgggtgtggtcatcggcgaccgcccgctggacgagcttgtgccgctc
taccgcgatccgcgctccgacatgccggccacgcagttcaacatgaagtgggtcgaacct
gcggggctggtgaagttcgacttcctgggcctcaagaccctgaccgtggtgcagaacgcc
atcgacctgatccatgcctcgggccggcagttgcacgaagcgccggacggcagcaccatc
taccagccgcccgagggggccgagaaccagatcaacgccatcccgctggatgaccccgcc
acctacgccctttatgccagcgccaagacggttgccgtgttccaggtggaaagctcgggc
atgatggatgcgctgcggcgcatgaaacccacctgcatcgaggatatcgtggccctcgtg
gcgctctaccgccccggcccgatggagaacatcccgaaatactgcgaggtgaagaacggc
atttccgatcgcgaccgcctgcatcccctgatcgaccatatcctcgacgagacgcagggc
atcatcgtctaccaggaacaggtgatgcagatcgcgcaggaaatggcgggttacagcctt
ggcggcgccgacctgctgcgccgcgccatgggcaagaagatcaaggaggcgatggacgcc
gaacgccccaagttcctggaaggcgcggccaagaacggggtggacgaggccaaggcgctc
gaggtctggaacctgctcgagaaattcgccaattacggcttcaacaagtcccacgccgcc
gcctatgccgtggtcagctaccagaccgcgtggctcaaggcgaaccatccggtcgagttc
atggcagccgtcatgaattgcgacatccacctcaccgacaagctgggcatctacaagcaa
gaggtcgaccgcctcggcatcgacacggtgccgccctgcgtgaaccgctcggccgcgagt
ttcaccgtcaaggatggcaagatcctctatgcgctgggcgcgctcaagaacgtgggcgtc
gacgcgatgcgcctgatcgtcgaggcgcgccagaccgagcgcggggaaaaaccttttgcc
acgctcttcgatttcgcccgccgcgttgacctgaaacgcgtcggcaaacgctctctggaa
atgctcgcccgcgccggggccttcgacgatctcgaccgcaaccgcgcgcgggtctttgcc
gcgctcgacgctctgacggcctattccgccgcgatccacgagcagaaggccagcaaccag
gtcagcctcttcggcgaagcgggcgaggacctgcccgagccgcgcctgcccgaagccagc
gactggatgcccaatgaacggctggccaacgagcatcaggcggtcggattctacttctcg
ggccacccgctggacgattacatgcctgccctgaaacggcgcggggtgctgaccctgcac
gaggtcgaacagcgcgtgcagggtggcgccttcgtcaccaagatggccggcgccgtctcg
gtccggcaggaacgcaaaagccagcgcggcaaccgtttcgccttcgtctcgctctcggac
ccgtccggcctttacgaggtcaccgtcttctccgacgtgctcgaggccagccgccagcat
ctcgagaccggctcgaacgtcatcctgcaggtcaaggcggagctggaaagcgaccagctc
aagctgctcgccgccgccgtgcagcccgtcgatgatggcatcgccgccgaagcggggggc
ctgcgcgtcttcgtcgaggacccgcgcggggtcgagacggtctcgaccctgctcgaccgc
gcgcgagaggacgcgatgcgctcggccaaggggccgatccacctgtgcctgatggccccc
gacctgcccggcgaggtcgaggtcctgttgggcgaggatttccccgtctccccccagatc
aagggcgcgctgcgcagcctggaaggggtggtgacggtcgaagaggtctag
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