Roseicyclus elongatus: roselon_00462
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Entry
roselon_00462 CDS
T03060
Name
(GenBank) Integration host factor beta subunit
KO
K05788
integration host factor subunit beta
Organism
red
Roseicyclus elongatus
Brite
KEGG Orthology (KO) [BR:
red00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
red03032
]
roselon_00462
03036 Chromosome and associated proteins [BR:
red03036
]
roselon_00462
03400 DNA repair and recombination proteins [BR:
red03400
]
roselon_00462
DNA replication proteins [BR:
red03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
roselon_00462
Chromosome and associated proteins [BR:
red03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
roselon_00462
DNA repair and recombination proteins [BR:
red03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
roselon_00462
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_euk_1
HU-HIG
HU-CCDC81_euk_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
AHM02906
UniProt:
W8S2G8
LinkDB
All DBs
Position
complement(434498..434785)
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AA seq
95 aa
AA seq
DB search
MIRSELIQKLADENPHLYQRDVERIVNAIFEEIIEAMANGNRVELRGFGAFSVKKRDARV
GRNPRTGESVQVDEKHVPFFKAGKLLRDRLNGQDA
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgatacgctccgaactcattcagaagctggcggatgaaaacccgcatctctaccaacgg
gatgtcgagcggatcgtgaacgcgattttcgaagagatcatcgaagccatggccaacgga
aaccgtgtcgagttgcgcggcttcggggcgttttcggtgaagaaacgcgacgcgcgcgtc
ggccgcaatccgcggacgggcgaaagcgttcaggtcgatgaaaaacacgtccctttcttc
aaggccgggaagctgctacgcgacaggttgaacggccaagacgcgtga
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