Roseicyclus elongatus: roselon_00582
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Entry
roselon_00582 CDS
T03060
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
red
Roseicyclus elongatus
Pathway
red03030
DNA replication
red03430
Mismatch repair
red03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
red00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
roselon_00582
03430 Mismatch repair
roselon_00582
03440 Homologous recombination
roselon_00582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
red03032
]
roselon_00582
03400 DNA repair and recombination proteins [BR:
red03400
]
roselon_00582
Enzymes [BR:
red01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
roselon_00582
DNA replication proteins [BR:
red03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
roselon_00582
DNA repair and recombination proteins [BR:
red03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
roselon_00582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
PAS_4
PAS_9
PAS
RNase_H_2
MFS_MOT1
PAS_8
PAS_7
Motif
Other DBs
NCBI-ProteinID:
AHM03022
UniProt:
W8RYU2
LinkDB
All DBs
Position
557248..559254
Genome browser
AA seq
668 aa
AA seq
DB search
MLTRLSLRLRIFLFFAFLAMASSILAIAGLALGYSRLGEAHALSAFVIAGVIAVLAIFAL
TTWVWVLFDENVAKPVERLAAEMRARAHADVEGEIDHGEAKFLGDLGSAAAAVASNLTET
RNAMALAVGRETARLTTEKTRLETLLAEMPDGVLFCTPDHRIALYNGHCRDILGETEAVG
LGRSVMGLLKPGPIEQAYARLVDGEAEDGTDLLVTTRAGARLLEARMRLLRLEGQETETP
GYVLTLRDLTTDLATHAERAHLFDTFLDGVKDTLPDLPEGMARDRLATLTEETDRRKAPT
DTQWWPMEALSARDLGTALSTRLTRKGLSLDNALGDTGVRCDGFAITRLLERLALEWSGI
GGKDLSLRIVAEAPDHVVLSLEAAGDAPAKAEVADWLETPLSPGLTRFSGRDVLTSHGTR
LLPEPAGPGHAALRLRLPLADPKPPVPSRVVLYDFELLNAAIPDDLAAAALRDLSYVIFD
TETTGLNPQVDEICQIAAVRVVNGRLVDGERFDMLVNPGRKIPAASTAVHHITDAMVADA
VDVSEAIERFHAFADGSVLVAHNAPFDMSFLRRREREIGKRFDQPILDTVLCSAILYGQS
AEHTLDALSTRLGVSIPDEARHTAIGDAIGTGEAFRKMIPMLEAAELPNLGALIQAFDRH
TRLIEHLN
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgttgaccagattgtccctgcgtttgcgcatattcctgttcttcgcctttctcgcaatg
gccagttcgatcctggcgatcgcgggactggcgcttggctattcacggctgggcgaggcg
cacgcgctttcggccttcgtgatcgcgggcgtgatcgccgttcttgcgatctttgccctg
acgacatgggtctgggtgctgttcgacgagaacgtggccaaacccgtggaacggctggcc
gccgaaatgcgcgcccgcgcccatgccgatgtcgagggcgagatcgaccatggcgaggcg
aagttcctgggcgatctgggctcggccgcggcggccgtcgcctcgaacctgactgaaacg
cgcaatgccatggccctggcggtcgggcgcgaaaccgcgcggctgacgaccgagaagaca
cggctggaaaccctgttggccgagatgccggacggggtgctgttctgcacgccggatcac
cggatcgccctttataacggccattgccgcgacattcttggcgaaaccgaggccgtgggc
ctgggccgttcggtcatggggttgctgaagcccggcccgatcgagcaggcctatgcccgc
cttgtggatggtgaggccgaggacggcaccgaccttttggtgacaacgcgggcgggggca
cggttgctcgaggcacgcatgcgcctgctccgcctcgaggggcaggaaaccgagacaccg
ggctatgtcctgaccctgcgcgacctgacgacggatctggccacccatgccgagcgggcg
catctgttcgacacgttcctcgacggtgtcaaagacaccctgcccgacctgcccgagggg
atggcgcgggatcggttggccaccctgaccgaggagaccgaccgccgcaaagcaccgacg
gatacgcaatggtggccgatggaggcgctgagcgcgcgcgatctgggcaccgccttgtcg
acccgtcttacacgcaagggcctgtccctggacaatgccctgggcgacaccggcgtgcgc
tgtgacgggttcgcgatcacgcgcctgttggagcggctggcgctggaatggtccggcatc
ggtggcaaggacctgagcctgcgcatcgtcgccgaagcgcccgatcatgtcgtcctcagc
ctcgaggccgcgggcgacgcgcccgcgaaggccgaggtcgccgactggctggagaccccc
ctgtcccccggtctgacgcggttctccgggcgcgatgtgctgacctcgcatggcacgcgc
ctgttgccggaaccggccgggcccggccacgccgcgctgcgcctcaggctgcccttggcg
gatcccaaaccgccagtcccctcgcgggtggttctgtacgatttcgagctgctgaatgcg
gccattcccgacgatctggcggcggcggccttgcgggatctgtcctatgtcatcttcgac
accgagacgacggggttgaacccgcaggtcgacgagatctgccagatcgccgccgtgcgg
gtcgtcaacgggcgtctcgtggatggcgaacgcttcgacatgctggtgaatccggggcgc
aagatccccgccgcctcgaccgcggtgcaccacatcacggatgcgatggttgcggacgct
gtggatgtctccgaggcgatcgagaggtttcacgcctttgccgacggctcggtcctcgtg
gcgcataacgcgccgttcgacatgagcttcctgcggcgacgggaacgggaaatcggcaag
cgcttcgaccagccgatcctcgatacggttctgtgttcggcgatcctgtacggccaatcg
gcggaacacacgctggatgcgctgtccacacggctgggcgtgtccatccccgacgaggca
cggcacacggccatcggcgatgccatcggcaccggcgaggcctttcgcaagatgatcccg
atgctggaagcggcagagctgcccaatctgggggcattgatccaggctttcgaccggcac
accagattgatcgaacatctgaattga
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