Roseicyclus elongatus: roselon_01303
Help
Entry
roselon_01303 CDS
T03060
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
red
Roseicyclus elongatus
Pathway
red03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
red00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
roselon_01303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
red03400
]
roselon_01303
Enzymes [BR:
red01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
roselon_01303
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
roselon_01303
DNA repair and recombination proteins [BR:
red03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
roselon_01303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
AHM03691
UniProt:
W8S4G6
LinkDB
All DBs
Position
complement(1294099..1294962)
Genome browser
AA seq
287 aa
AA seq
DB search
MPELPEVETVRRGLAPVLEGARLTEALVRRPDLRWPFPDRMAARLTGARVLRLRRRSKYI
LADLDTGETLIIHLGMSGRMLISGDGAAQMPGAFAHDHGQMDKHDHVILTTDAGVRITFN
DARRFGAMDLAPTERVEDHWLLSGLGPEPLGNHFDAPYLAGRFAGKRSPVKSALLDQRIV
AGLGNIYVCEALWRSGISPLRHAGRISEARIARLVPAIRDVLSEAIEAGGSSLRDYRQAD
GDLGYFQHRFAVYGREGEPCQTPDCQGEIRRKVQSGRSSFYCAACQR
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
ttgcccgaacttccagaagtcgagacagtccgtcgcgggctggcccccgtgctcgagggg
gcacgtctgaccgaggcgctggtgcggcggcccgatctgcgctggccctttcccgaccgg
atggccgcccgtctgaccggcgcgcgggtgctccggttgcggcggcgctcgaaatacatc
ctggccgatctcgacaccggcgagacgctgatcatccatctgggcatgtcggggcggatg
ctgatttccggcgacggcgcggcgcagatgcccggtgcctttgcccatgatcacggccag
atggacaaacatgaccatgtgatcctgacaaccgacgcgggcgtgcgcatcaccttcaac
gatgcccgacgcttcggtgcgatggatctggcaccgaccgagcgtgtcgaggatcactgg
ctgctgtcgggtctcggccccgagcccttgggcaaccacttcgatgcgccctatctggcg
ggtcggttcgcgggcaaacgcagcccggtgaaatcggcgctgctggatcagcgcattgtg
gccgggctgggcaatatctacgtctgcgaggcgctgtggcggtccggaatctcgcccctg
cgccatgccgggcgcatttcggaggcgcgtatcgcgcgactcgttcccgccatccgcgat
gtcctgtccgaagcgatcgaggccggcggatcctcgctgcgcgactatcggcaggccgat
ggcgatctgggatattttcaacacaggttcgcggtctatggacgcgagggcgaaccatgc
caaacgcctgactgccaaggcgaaatccggcgcaaggtgcaatctggtcgctccagcttc
tactgtgcggcctgccaaagatag
DBGET
integrated database retrieval system
