Roseicyclus elongatus: roselon_01396
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Entry
roselon_01396 CDS
T03060
Name
(GenBank) ATP-dependent nuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
red
Roseicyclus elongatus
Brite
KEGG Orthology (KO) [BR:
red00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
red03400
]
roselon_01396
Enzymes [BR:
red01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
roselon_01396
DNA repair and recombination proteins [BR:
red03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
roselon_01396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AHM03781
UniProt:
W8S4P0
LinkDB
All DBs
Position
1384352..1387339
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AA seq
995 aa
AA seq
DB search
MTMLFDHEAAPRLFATPIGVDFCAALIVGLDARLATQPPEAIARVEIHVANARLQRRIQT
LYAERGPGFLPRIRPVTALGDLADLAGLPPAISPLRLRLMLAEQIGRLIDAAPDLAPRTA
LYDLSDSLADLMAEMFEERVTPEMIHDLDVGSHSDHWARAQTFVTAITAYFAEEASLTPE
ARAARVTDHLIRQWEVAPPGHPVIVAGSTGSRGATARLMAAVARLPQGAVILPGLDREMP
AAIWARLLQDRQGQGLAGEDHPQFRLARIAEMLGLDPATLPDWAPAMTPVNRARNAAVSL
ALRPAPVTDQWRKEGPHLPDLGGAFEGVTLLEAPSPQIEAGAIALRLRQAVDKGRRGALV
SPDRILTRQVAAALDRWRITPDDSAGTPLDQTVAGRFLRLVAEVFCGPVTAEVFVAILSN
PMCHSGTDRGPHLRLLREFELRGLRGKTGFPDPATLNAWAARQEDPAAQEWADWVGRVLL
PPQANGDLPFADHVARHVVLAEALATGQAGADTGELYREAAGEDLARLLAELRAEGGAGG
AMSARDYADMFGGLIADRQVRDGLRPHAQVLIWGTQEARVQGADLVILAGLNEGTWPAAP
EADPWMNRPLRAAAGLRLPDRVIGLSAHDFQQAIAAPEVWLSRARRDAETDTVPARWLNR
LTNLLDGASETSKAVLDGMRHRGDAWIAMAEALASPTEAQLAAARPASRPAPAPPLAARP
RQLSVTQVETLIRDPYEIYARKVLRLKPLEPLRQDPDAGERGTVLHDILRVFVEETRAGL
PAHAAARLMEIADDVLAARAPWPAARRVWRARLDRVAPHFLKTEAERRSCGAPWLLESPA
SWGVPGMAVTLTGTADRLDRLSDGGVAIYDYKTGQVPSEDQERAFTKQLWIEALMAEDGA
FDGQDGPDLAAHIAYLGLGATPATVAHDPTPQDLAEIRAGLQRLLGHFNDPRTGYSARRA
VFEARYTRDFDHLARYGEWDETEAAQVLPVGRTDD
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
gtgaccatgctgtttgaccacgaggccgcgccgcggctgttcgccaccccgatcggcgtc
gatttctgcgccgccctgatcgtgggactggatgcgcgcctggccacacagccgcccgag
gcgatcgcgcgggtcgagatccatgtggcgaacgcccgtctgcagcgccggatccagacg
ctctatgccgaacgcgggccggggttcttgccccgcatccggccggtcacggcgctgggc
gatctggccgatctggcgggcctgcccccggcgatctcgcccctgcggttgcgcttgatg
ctggccgagcagatcgggcggctgatcgatgccgcgcccgatctggccccgcgcaccgcg
ctttatgacctgtcggacagtctggccgacctgatggccgagatgttcgaggaacgcgtg
acgcccgagatgatccatgatctggacgtgggcagccattcggaccactgggcgcgggcg
cagacctttgtcaccgcgatcaccgcgtatttcgccgaagaggcgtcgctgacgcccgag
gcgcgcgcggcgcgtgtcaccgaccacctgatccgccagtgggaggtcgccccgcccggc
cacccggtgatcgtggccggatcgaccgggtcgcggggggcgaccgcacggctgatggcg
gcggttgcgcgcctgccgcagggggcggtgatcctgcccggcctcgaccgcgagatgccg
gccgcgatctgggcgcgcctgttgcaggaccgtcaggggcagggccttgcgggcgaggat
catccgcaattccggctggcgcggattgccgagatgctggggctggatcctgcgaccctg
cccgattgggcgccggccatgaccccggtcaaccgcgcgcgcaacgccgccgtatcactg
gccctgcgcccggccccggtgaccgatcaatggcgcaaggaggggccgcacctgcccgat
cttggcggcgcgttcgagggcgtgaccctgctcgaggcgcccagcccgcagatcgaggcc
ggggccatcgcgctgcgcctgcgacaggcggtggataaggggcggcgcggcgcgctggtg
tcgcccgaccggatcctgacgcggcaggtggccgccgcgctggatcgctggcgcatcacg
cccgatgacagcgcgggcacgcccttggatcagaccgtggcggggcgttttctgcgcttg
gtggccgaggtcttttgcgggccggtcacggccgaggtcttcgtggccatcctgtcgaac
ccgatgtgccattcgggaacggatcgcggcccgcatctgcgcctgctgcgcgaattcgag
ttgcgcgggttgcgcggcaagacggggtttcccgaccctgcgacgttgaacgcctgggcc
gcgcgccaggaggatccggccgcgcaagagtgggcggattgggtgggtcgcgtcctgttg
ccgccgcaggccaatggcgatctgccctttgccgatcatgtcgcccgccatgtggtgctg
gccgaggcgttggcgacggggcaggcgggggccgatacgggcgagctgtaccgcgaggcg
gcgggcgaagatctggcgcggcttctggccgaattgcgggccgaggggggcgcgggcggc
gcgatgagtgcgcgcgactacgccgacatgttcggcgggctgatcgccgaccggcaggtg
cgcgacgggctgcgcccgcatgcccaggtcctgatctggggcacgcaggaagcccgcgtt
cagggcgccgatctggtgatactggcggggttgaacgagggcacctggcccgccgcgccc
gaggccgacccgtggatgaaccgccccttgcgggcggcggcgggcctgcgcctgccggac
cgggtgatcggcctgtcggcgcatgatttccagcaggccatcgccgcgcccgaggtctgg
ctgtcgcgggccagacgcgatgccgaaaccgacacggtgccggcgcgctggctgaaccgt
ctgacgaacctgctggacggggcgagcgagacctccaaggcggttctggacgggatgcgc
caccgtggcgatgcctggatcgcgatggccgaggcgctggccagcccgaccgaggcgcaa
ctcgccgcggcgcgcccggcctcgcgtccggccccggccccgccgcttgcggctcggccc
cggcaattgtcggtcacgcaggtcgagacgctgatccgcgacccctacgagatctacgcg
cgcaaagtcttgcgcctgaagccgttggagccgttgcgccaggaccccgacgcgggcgag
cggggcaccgtgctgcacgatatcctgcgggtctttgtcgaggaaacgcgcgccggcctg
cccgcgcatgcggcggcccgcttgatggagatcgccgacgatgttctggccgcgcgtgcc
ccatggccggccgcgcgccgggtctggcgcgcaaggctggaccgtgtcgcgccgcatttc
ctcaagaccgaggccgagcggcgcagctgtggcgcgccatggttgctggaaagccctgcc
agttggggcgtgccggggatggcggtgaccctgaccggcaccgccgaccggttggaccgc
ctgagcgacgggggcgtggccatctacgactacaagaccggacaggtgcccagcgaggat
caggagcgcgcctttaccaagcaattgtggatcgaggcgctgatggccgaggatggcgcc
tttgacgggcaggacggccccgatctggcggcgcatatcgcctatctggggctgggcgcg
accccggcgacggtggcccatgatccgacgccgcaggatctggccgagattcgggccggc
ctgcagcgcctgttggggcatttcaacgacccgcgcacgggctatagcgcgcggcgcgcg
gtgttcgaggcgcgctatacgcgcgatttcgaccatctggcgcgctatggcgaatgggat
gaaaccgaggcggcgcaggtgctgccggtggggcggaccgatgactga
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