Roseicyclus elongatus: roselon_01422
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Entry
roselon_01422 CDS
T03060
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
red
Roseicyclus elongatus
Pathway
red03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
red00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
roselon_01422
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
red03019
]
roselon_01422
03400 DNA repair and recombination proteins [BR:
red03400
]
roselon_01422
Enzymes [BR:
red01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
roselon_01422
Messenger RNA biogenesis [BR:
red03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
roselon_01422
DNA repair and recombination proteins [BR:
red03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
roselon_01422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Rhodanese
ResIII
Motif
Other DBs
NCBI-ProteinID:
AHM03807
UniProt:
W8S0X0
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All DBs
Position
1411540..1413597
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AA seq
685 aa
AA seq
DB search
MLETRPDASALLSQVFGFPGFRPGQEEIVGAVAAGHNVLAIMPTGGGKSLCFQLPALMRT
GVTVVISPLIALMRDQVRGLRELGVEAGALTSGNTPEETDAVWQALDEGRLKLLYIAPER
LASSGAERLLTRAGVSLIAVDEAHCVSQWGHDFRPDYLRIGALRRALGVPLAAFTATADA
ETRAEIVNRLFDGAPPETFLRGFDRPNLSLAFEVKNQPRQQILSYAAARKGQSGIVYCGT
RAKTEALAAALREAGHSACHYHGGMEAQDRRHVEHRFATEDGLIVVATVAFGMGVDKPDI
RWVAQADLPKSIEAYYQEIGRAGRDGAPADTLTLYGPDDIRFRRQQIDEGLAPPERKAAD
HARLNALLGLAEAITCRRQKLLGYFGEEAQPCGNCDLCTQAPETFDATTAVRKALSAILR
TGEYFGTGHLIDILLGNPTDKVQARGHDRLPTFGVGTDFNRRGWQAVFRQMMGHDLVRPD
PARHGALRMTEAARPILKGEAEITLRRDTIAKSASRRPAARMLVSDEDAPLLSALKAKRR
ALAEAARVPAYVIFTDRTLIEMAETRPQTLDDVARISGVGATKLERYGDAFLGVITGEAA
APLHPARRKLAGRAAGSLYDRLLAVQTDLARGDTGLDKPLSCSPAQLAKLADLRPSDRST
VERLLGERRAERYADAFLDVLREAG
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgctggagacccgcccagacgcatccgccctcctctcgcaggtctttggctttccgggg
ttccgccccggccaggaagagatcgtcggcgccgtcgccgcgggccataacgtgttggcc
atcatgccgacggggggcggcaaatccttgtgctttcagttgcccgcgctgatgcggacg
ggcgtcaccgtggtcatttcgcccctcattgcgctgatgcgcgatcaggtgcgcggcttg
cgcgaactgggggtcgaggccggcgcgctgacctcgggcaacacaccggaagaaaccgat
gccgtgtggcaagcccttgatgaggggcggctgaagcttctctatatcgcgcccgagcgg
cttgcctcgtcgggggccgaacgtctgctgacccgcgcgggggtgtcactgatcgccgtg
gacgaggcccattgcgtcagccagtggggccatgatttccgccccgactacctgcgcatc
ggggcgctgcggcgggcgctgggcgtgccgctggccgcctttaccgccaccgccgacgct
gaaacgcgggccgaaatcgtcaatcgcctgttcgacggtgcgccgcccgaaacctttctg
cgcggctttgaccgcccgaacctgtcgctggccttcgaggtcaagaaccagccgcgtcag
caaatcctcagctatgccgccgcccgcaagggccagtccggcatcgtctattgcggcacc
cgcgccaagaccgaggcgttggcggccgcattgcgcgaggcggggcattcggcctgtcac
tatcacggcgggatggaggcacaggaccgtcgccatgtggaacaccgcttcgcgaccgag
gacgggctgatcgtggtcgccaccgtcgccttcggcatgggggtggacaagcccgatatt
cgctgggtggcgcaggccgatctgcccaaaagcatcgaagcctactaccaggagatcggg
cgcgccggccgcgatggcgcaccggccgatacgctcacgctctatgggcccgacgatatc
cggtttcgccgccagcagatcgacgagggcctggccccgccggaacgcaaggccgccgat
cacgcgcgcctgaacgcccttctgggtctggccgaggcgatcacctgccgccgtcagaag
ctgctggggtatttcggcgaagaggcgcagccctgcggcaactgcgatctgtgcacccaa
gcgcccgagaccttcgatgccacgaccgccgtgcgcaaggcgctcagcgccattctgcgg
acgggcgagtatttcggcaccggccacctgatcgacattctgctgggaaaccccaccgac
aaggtgcaggcccgtggccatgatcgtttgccgaccttcggcgtgggcacggatttcaac
cggcggggatggcaggccgtgtttcgccagatgatgggtcatgatctggtgcgccccgat
ccggcacggcacggcgcgctgcgcatgaccgaggcggcgcgcccgatcctcaagggcgag
gccgagatcacgctgcgccgcgacaccatcgcgaaatccgccagccgccgccccgccgcc
cggatgctggtctccgacgaggacgcgccgctcttgtccgcgctcaaggccaagcgccgc
gccctggccgaggcggcgcgcgttccggcctatgtcatatttaccgaccgcaccttgatc
gaaatggccgagacacgcccgcagacgctggacgacgtggcgcggatctcgggcgtcggc
gcgaccaagctggagcgctacggggatgcgtttctgggcgtcatcaccggcgaggccgca
gcccccctgcaccccgcccggcgcaagctggcagggcgcgcggccggatccctctatgat
cggctgctggccgtgcagaccgatctggcgcgtggcgatacgggcctcgacaagccactg
tcctgttcgccggcgcaattggcgaaactggccgatctgcgccccagcgacaggtccacg
gtcgagcgtctgttgggcgaacgtcgtgccgagcgctacgccgatgcctttctcgatgtg
ctgcgcgaggctggataa
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