Roseicyclus elongatus: roselon_01843
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Entry
roselon_01843 CDS
T03060
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
red
Roseicyclus elongatus
Brite
KEGG Orthology (KO) [BR:
red00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
red03021
]
roselon_01843
Transcription machinery [BR:
red03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
roselon_01843
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_11
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
AHM04206
UniProt:
W8S5U2
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All DBs
Position
1775051..1775947
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AA seq
298 aa
AA seq
DB search
MSNFANLPAPSPEQGLNRYLQEIRKFPMLEPEEEYMLAKRWVEDQDTEAAHKMVTSHLRL
AAKIAMGYRGYGLPQAEVISEANVGLMQAVKRFDPEKGFRLATYAMWWIRAAIQEYILRS
WSLVKLGTTSAQKKLFFNLRKAKARIGALEEGDMRPENVARIANDLGVTETEVISMNRRL
SGGDASLNATIGSEDDGSAQWQDWLEDEGANQAEDYAEKDEFTQRMALMEEAMEVLNDRE
RDILTQRRLQDSPVTLEDLSGVYNVSRERIRQIEVRAFEKLQKRMRDLAREQGMMASA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgagcaattttgcaaatttgccggcaccgtcgccggagcaggggctgaaccgctacctg
caggaaatccgcaagttcccgatgctagaacccgaagaagaatacatgttggccaagcgc
tgggtcgaggaccaggataccgaggccgcgcacaagatggttaccagtcacctgcgtctg
gctgccaagatcgccatgggctatcgcggttacgggctgccgcaggccgaggtgatctcg
gaggccaatgtcggcctgatgcaggcggtcaaacggttcgatcccgaaaagggctttcgc
ctggccacctacgcgatgtggtggatccgtgccgcaattcaggaatacatcctgcgatcc
tggagccttgtgaaactgggcacgaccagcgcgcagaaaaagctgttcttcaacctgcgc
aaggccaaggcgcgcatcggggcattggaagagggcgacatgcgccccgaaaacgtggcc
cgtatcgcgaatgacctgggcgtgaccgagaccgaggtcatctcgatgaaccggcgtctg
tcgggcggcgatgcctcgctcaacgcgacgatcgggtcggaagatgacggctcggcgcaa
tggcaggactggctggaagacgaaggcgcgaaccaggccgaggactacgccgagaaggac
gaattcacccagcgtatggccctgatggaagaggcgatggaggtgctcaatgaccgcgag
cgcgatatcctgacccagcgccgcctgcaggatagccccgtcacgcttgaggatctgtcc
ggcgtctacaatgtcagccgcgaacgcatccgtcagatcgaggtgcgcgcctttgaaaag
ctgcaaaagcgcatgcgcgacctggccagggagcaggggatgatggcctcggcctga
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