Roseicyclus elongatus: roselon_03155
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Entry
roselon_03155 CDS
T03060
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
red
Roseicyclus elongatus
Brite
KEGG Orthology (KO) [BR:
red00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
red03016
]
roselon_03155
Enzymes [BR:
red01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
roselon_03155
Transfer RNA biogenesis [BR:
red03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
roselon_03155
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Ortholog
Paralog
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
wHTH-Calcineurin_assc
Motif
Other DBs
NCBI-ProteinID:
AHM05422
UniProt:
W8S5D3
LinkDB
All DBs
Position
complement(3020707..3021867)
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AA seq
386 aa
AA seq
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MPKTLTTTDALADFCARAADAPYVTVDTEFLRERTYYAQLCLVQLALPGEGDDDAVLVDP
LADGMDLAPLYALFRNRSVVKVFHAARQDLEIFHVEGGVVPAPLFDTQVAAMVCGFGDQV
GYETLVRKIAKASLDKSSRFTDWSRRPLSDAQKTYALADVTHLRQIYEHLSARLATSGRT
HWLEEELATLTDAENYVVTPEDAWKRLKLRTTSPRLLAVARELAAYRERTAQEKNIPRNR
ILKDDALMELASTKPKSVQDLSKSRLLLRDARKGAIAEGLVAAVKRGLDTPPDKVPHVPK
ARDRSGMNPALADLLRVLLKAKAEEAGVAAKLIASASDLDDIASGLHDGIWATGWRREVF
GDDALRLIEGKIALSAIGQKVKIVTV
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
gtgcccaagaccctgaccacgaccgacgccctggccgatttctgcgcccgggccgctgac
gccccctatgtgacagtcgataccgagttcctgcgcgagcggacctattacgcccagctg
tgccttgtgcagctggccctgccgggcgagggggacgatgacgccgttctggtcgacccg
ctggccgacgggatggacctcgcgccgctgtatgcgctgtttcgcaacagatccgtggtc
aaggtgtttcacgccgcgcgtcaggacctggaaatctttcatgtcgagggcggcgtcgtg
cccgcgccgctgttcgacacgcaagtcgcggcaatggtctgcggttttggcgatcaggtc
ggctacgagaccctcgtgcgcaagatcgccaaggccagcctcgacaaatcctcacgcttc
accgactggtcgcggcgaccgctcagcgacgcgcaaaagacctatgccctggccgatgtg
acccatctgcgtcagatctacgaacacctctcggcccgcctcgcgacatcggggcgaacc
cactggctcgaggaagagctggcgacactgaccgatgccgagaattacgtggtcacgcct
gaggatgcatggaaacgcctgaagctgcgcacgacctcgcccaggctgttggccgtggcc
cgcgaactggccgcctatcgcgaacgcacggcacaggaaaagaacatcccccgcaaccgc
atcctcaaggatgacgcgttgatggaactggcctcgaccaagccgaaatcggttcaggac
ctgtcgaaatcgcggctgcttctgcgcgatgcgcgcaagggcgcgattgccgaagggttg
gtcgccgccgtcaagcgcggcctcgacacgccgcccgacaaggttccgcatgtgcccaag
gcgcgtgatcggtccgggatgaacccggcgctggccgatctgctgcgcgtgctgctcaag
gccaaggccgaagaggccggcgtggcggccaagctgatcgcctcggcctcggatctcgac
gatatcgcctcggggctgcatgacgggatctgggccaccggctggcggcgcgaggtgttc
ggcgatgatgcgctgcgcctgatcgagggcaagatcgccctgtccgcgatcgggcaaaag
gtcaagatcgtgaccgtctga
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