Roseicyclus elongatus: roselon_03517
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Entry
roselon_03517 CDS
T03060
Name
(GenBank) ATP-dependent DNA helicase pcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
red
Roseicyclus elongatus
Pathway
red03420
Nucleotide excision repair
red03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
red00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
roselon_03517
03430 Mismatch repair
roselon_03517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
red03400
]
roselon_03517
Enzymes [BR:
red01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
roselon_03517
DNA repair and recombination proteins [BR:
red03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
roselon_03517
MMR (mismatch excision repair)
Other MMR factors
roselon_03517
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
nSTAND3
AAA_16
PhoH
AAA_22
UvrD_C_2
UvrD_C
AAA_25
SLFN-g3_helicase
AAA_30
AAA_29
DEAD
IstB_IS21
ATPase
ResIII
NPHP3_N
T2SSE
Motif
Other DBs
NCBI-ProteinID:
AHM05772
UniProt:
W8S6A0
LinkDB
All DBs
Position
3394612..3396432
Genome browser
AA seq
606 aa
AA seq
DB search
MELTEKQIQVLDADGHLLVTGGPGSGKTTISIFKAAQVAEAILRPGQKVLFLSFARATVS
RVVEAIEFEQKIPKEIKRRIDVETYHSFFWRILKAHGYLAGLPRDLTILTPSAEAIALSD
IRNSHGADNKLSDPQKQAKRAAETAKRYRLATHEGRVCFDLFAPYVGDLLHGSQTLRRLI
ATMYPVIILDEFQDTNPEQWRVVQALGAFCRLIALADPEQRIFDFIGADPERLNHFRCTF
APTEIDFGTDNYRSSGTDIATFANDILKGTFSQSSYTGIDFELFDPFPDPAMTKLITTTY
AARGRLVASGKSDWSLAVLVPTKKMTRLVSDKFREPPAGMQPIAHTAVVELEAAILGSEI
IAHLMLPDLGDAHFSEFIDLVCNFFQGKGGDRPTTGALKEAAAVRSAYEKWLAALAAGKK
PHANSMIHALASVYEQARSVTLTGDPDKDWRAVRATLEAGACSRLKEIGLEVRNIRLLER
GGQLRQDLTQDWRNNGSYANAHAIVQQAFVQEHFATGSKPETGVIVMNMHKAKGKQFDEV
VIFEGWPRRNKGKIVANLDRIVRNNDRDEINDGSRQNFRVSVTRGRQRTTILTPKGDPCV
LLLPDE
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggagctgactgagaagcaaatccaggtcttggatgctgacggccaccttcttgttacc
ggagggccggggtccggcaagacaaccatttccatattcaaggccgctcaggttgccgag
gctatcctccggccagggcaaaaggtgctgtttctgagctttgccagagcgacagtatct
cgggtcgtggaagctatcgaatttgagcaaaaaatccccaaggaaatcaaacgccggata
gacgttgagacctaccattccttcttttggcgcatcctcaaggcgcacggttacctcgca
ggtcttccgagggacctcacgattcttacgccttccgccgaagcgattgccctttccgac
attcgcaacagccacggagccgacaacaaactgagcgaccctcagaaacaggcaaagcga
gcggcggagacggctaaaagataccgtctggcaactcacgagggccgcgtgtgcttcgac
ctcttcgcgccgtatgtcggcgatctgctgcatggaagccagacactgaggcggcttatc
gccaccatgtatcccgttatcatccttgatgaatttcaggatacgaacccagagcaatgg
cgtgtggttcaggcgctcggagccttctgtcgcctcattgcacttgctgacccggagcaa
cgcattttcgatttcatcggggccgatccggaacgactgaatcatttccggtgcaccttt
gctccaaccgagatcgacttcggtaccgacaactatcgaagtagcggtacggacatcgcc
acattcgcgaacgacattctgaagggcacctttagccagagctcctacaccggtatcgat
tttgagcttttcgaccccttcccggacccggccatgaccaagctgattacgaccacctat
gctgcacgaggacgacttgtagcgtccggtaaatctgattggtccttggctgtgctggtg
ccgacgaagaaaatgacccgtctcgtgtctgacaagtttcgggaaccaccagccgggatg
cagcccattgcccataccgctgtcgttgaactcgaagcggctattctcggatcagagatt
attgcgcatttgatgctgcctgacttgggcgacgctcatttttccgaattcattgatctg
gtctgcaacttctttcaggggaaaggcggtgatcggccgacaaccggcgctctcaaagag
gcggcagctgtccgcagtgcttatgaaaagtggcttgcggcacttgccgctggaaagaaa
ccgcatgcgaacagcatgatacatgctcttgcttcggtctacgagcaagcgcgctcagtc
acgttgacgggagaccctgataaggactggcgagccgtaagagccacgttggaagcaggg
gcgtgttcccggctgaaggaaattggcttggaggttcgcaatattcgtctcttagagcgt
ggtggccaattacgtcaggacctcacacaggactggcggaataacggttcctatgcaaac
gcgcacgcaatcgttcagcaggcttttgtccaagagcatttcgccacgggaagtaagcct
gagactggtgtgattgtgatgaacatgcacaaggccaagggaaagcaattcgacgaagta
gtcatcttcgagggctggccgcgcaggaataagggaaagatcgtcgcaaatcttgaccgt
attgtacgcaacaatgaccgtgacgaaatcaatgacggatcacgccagaatttcagggta
agcgtcaccagagggcgacagcgtacaacgattttgacaccaaaaggtgacccgtgtgta
ctgctgcttcctgatgagtag
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