Klebsiella electrica: electrica_00524
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Entry
electrica_00524 CDS
T06174
Symbol
deaD
Name
(GenBank) Cold-shock DEAD box protein A
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ree
Klebsiella electrica
Pathway
ree03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ree00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
electrica_00524 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ree03019
]
electrica_00524 (deaD)
03009 Ribosome biogenesis [BR:
ree03009
]
electrica_00524 (deaD)
Enzymes [BR:
ree01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
electrica_00524 (deaD)
Messenger RNA biogenesis [BR:
ree03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
electrica_00524 (deaD)
Ribosome biogenesis [BR:
ree03009
]
Prokaryotic type
rRNA helicases
electrica_00524 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
DeaD_C
CMS1
AAA_22
Cas3-like_C_2
DRTGG
Motif
Other DBs
NCBI-ProteinID:
QDI06758
LinkDB
All DBs
Position
539364..541325
Genome browser
AA seq
653 aa
AA seq
DB search
MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLGGRDVLGMAQTGSGKTAAF
SLPLLNNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLR
ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEG
HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTAYGMRKNEALVRFL
EAEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILI
ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
ERTMKLTIPEVELPNAELLGKRRLEKFAAKVQQQLESSDLDQYRALLAKIQPSAEDEELD
IETLAAALLKMAQGERPLILPPDAPMRPKREFRDRDDRFERRGDRNDRGPRGDRPERSGE
DRPKRERRDVGDMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFGTHSTIEL
PKGMPGEVLQHFTRTRILNKPMNMQLLGDAQPRPDRGGERRGGGERREGGRAFGGERREG
GRNFGERREGGRGDGRRFSGERRDSARAPRRDDASAAPRRDDSACRRRFGGDA
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattcgaaaccacttttgcagatctgggcctgaaggctcccatccttgaagcg
cttaacgatctgggttacgaaaaaccatctccgatccaggctgagtgcattccgcatctg
ctgggcggccgcgacgttctgggtatggcccagacgggtagcggtaaaaccgcagcgttc
tctttaccgctgctgaacaaccttgatcctgagctgaaagcaccgcaaattctggtgctg
gcgccgacccgcgaactggcggttcaggtcgctgaagcaatgacggacttctctaaacat
atgcgcggcgtaaacgtggtagccctttacggcggccagcgttatgacgtgcagctgcgt
gctttgcgccagggaccacaaatcgttgtggggaccccaggtcgtctgctggaccacctg
aagcgcggtactcttgatctctctaaactgagcggtctggtactggatgaagctgacgaa
atgttgcgtatgggcttcatcgaagacgtagaaacaattatggcgcagatcccggaaggt
catcagaccgctctgttctccgccaccatgccggaagcaatccgtcgcattacccgccgc
tttatgaaagagccgcaggaagtgcgcatccagtccagcgtcaccactcgcccggacatc
agccagagctactggactgcttacggtatgcgtaaaaatgaagcgctggtgcgtttcctg
gaagcagaagattttgatgcggcgattatcttcgttcgtaccaaaaacgcgaccctggaa
gtggctgaagcgctggagcgtagcggctacaacagcgccgcgctgaacggcgacatgaac
caggcgctgcgtgagcagactctggaacgtctgaaagatggtcgtctggatatcctgatt
gcgaccgacgttgcggctcgtggcctcgacgttgagcgtatcagcctggttgttaactat
gatatcccgatggactccgagtcttacgttcaccgtatcggccgtaccggtcgtgcgggt
cgtgctggccgcgcgctgctgtttgttgagaaccgtgaacgccgcttgctgcgtaacatc
gaacgcaccatgaagctgacgattccagaagtagagctgccgaacgctgaactgctgggc
aaacgccgcctggaaaaatttgctgccaaagttcagcagcagctggaaagcagcgatctg
gatcagtaccgcgcgctgctggcgaaaatccagccgtctgctgaagatgaagagctggat
atcgaaactctggccgcagcactgctgaaaatggctcagggcgaacgtccgctgattctg
ccgccggatgcgccgatgcgtcctaagcgtgaattccgcgaccgtgacgatcgtttcgaa
cgtcgtggcgaccgcaatgaccgtggcccgcgtggcgaccgtccggagcgtagcggcgaa
gaccgtcctaagcgcgaacgtcgcgatgtgggcgatatggaactgtatcgcattgaagtg
ggccgcgatgatggcgttgaagttcgtcatattgttggcgctatcgctaacgaaggcgat
atcagcagccgttacatcggtaacatcaagctgttcggtacccactccacgatcgaactg
ccgaaaggcatgccgggcgaagttctgcagcacttcacgcgtactcgcatcctgaacaag
ccgatgaacatgcagctgctgggcgatgctcagccgcgtccggaccgtggcggcgaacgt
cgtggcggcggtgaacgtcgtgaaggtggtcgtgcattcggtggcgaacgtcgtgaaggc
ggccgcaacttcggtgagcgtcgcgaaggcggccgtggtgatggtcgtcgtttcagcggc
gaacgtcgtgacagtgctcgtgccccgcgtcgtgatgatgcgtctgcggctccgcgccgt
gatgattccgcttgccgtcgtcgtttcggtggcgatgcgtaa
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