Klebsiella electrica: electrica_00888
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Entry
electrica_00888 CDS
T06174
Symbol
recD_1
Name
(GenBank) Exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ree
Klebsiella electrica
Pathway
ree03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ree00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
electrica_00888 (recD_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ree03400
]
electrica_00888 (recD_1)
Enzymes [BR:
ree01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
electrica_00888 (recD_1)
DNA repair and recombination proteins [BR:
ree03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
electrica_00888 (recD_1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
NAT10_TcmA_helicase
UvrD_C_2
Viral_helicase1
SH3_13
AAA_11
AAA_22
UvrD-helicase
SLFN-g3_helicase
nSTAND3
AAA_16
UvrD_C
AAA_28
PhoH
T2SSE
DEAD
MukB
DO-GTPase1
CbiA
AAA
Motif
Other DBs
NCBI-ProteinID:
QDI07109
LinkDB
All DBs
Position
909316..911154
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AA seq
612 aa
AA seq
DB search
MTMDELLLEAASQRLLRPLDVQFALMVAQEAHPAVKLAAAVLSRDAGEGHVCLPVSRLQT
DEFLSGKTSELREQLLAQAGFPDDWPALLLASEAVSGGERPTPIVLCGDRLYLNRMWRNE
LTVARFFNDANQVVDVDEALLAQTLDALFPASDETDWQKVAAAVALTRRISVISGGPGTG
KTTTVARLLAALIQTTRQPRCRIRLAAPTGKAAARLTESLGEALSRLPLTDEQKALLPTE
ASTLHRLLGAQPGSQRMRYHAGNPLHLDVLVVDEASMIDLPMMARLIDALPEHGRVIFLG
DRDQLASVEAGAVLGDICAWVNAGYTSGRAAQLERLTGHPVPAGESEVAGALRDSLCLLQ
KSYRFGSHSGIGSLARAVNNGDRHGVRVTLRQAYEDIALHPLSTTEEYEAMLMQSQAGYG
RYLQLLRERAEPEALIAAFGEFQLLCALRDGPYGVSGVNEQLEQMLNRRRAITLPRHSRW
YEGRPVMISRNDSALGLFNGDIGIALERGEGLRVWFPMPDGSIKSVQPSRLPEHDTAWAM
TVHKSQGSEFDHAALILPAKIVPLVTRELVYTAITRAKQRLSIYADEQVLTQSIVARTER
RSGLAEIFANRT
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgacaatggatgaactgttgctggaagcggccagtcagcgcctgctgcgcccgttagat
gtgcagtttgccctgatggtggcgcaagaggcgcatccggcggtgaaactggcggcggcg
gtactcagccgcgatgccggcgaagggcacgtttgcctgccggtatcgcgtctgcaaacg
gacgagttcctgagcggtaaaaccagcgaactgcgagaacagctgctggcgcaggcgggc
ttccccgatgactggcctgcgcttctgcttgcctcagaggcggtcagcggcggcgaacgt
ccgacgccgatcgtcctgtgcggcgaccggctctacctcaaccggatgtggcgtaatgag
ctgaccgtcgcccgcttcttcaacgacgctaaccaggtggtggacgttgacgaggccctg
ctggcccaaacgctggatgcgctgttccccgccagcgatgaaacagactggcaaaaggtc
gccgccgcggtggcgttgacccgccgtatttcggtgatttccggcggtcccggcaccgga
aaaaccaccaccgtcgccaggctgctggcggcgttgattcagaccacccggcaaccgcgc
tgccgcatccgactggcggcgccgaccgggaaagcggcggcgcgattgacggaatcgttg
ggggaggcgctgagtcgcctgccgctaaccgatgagcagaaggcgctgttgcctaccgaa
gccagcacgttgcatcgtctgctgggcgctcagcccggtagccaacggatgcgctaccac
gccggtaatccgctgcacctcgatgtgctggtggtggatgaagcttcaatgattgacctg
ccgatgatggcgcggctgattgatgccctgccggaacacgggcgggttattttcctcggc
gaccgcgatcagctggcgtcggtggaggccggagcggtgctcggggatatttgcgcctgg
gtcaatgccggctatacctccggacgtgcggcgcagctggagaggctgaccggccacccg
gtgccggcgggtgaaagtgaggttgccggcgcgctgcgcgacagcctgtgcctgctgcaa
aaaagctatcgttttggcagtcattccggcatcggtagcctcgcccgcgccgtgaacaat
ggcgatcgccacggcgtcagagtgacgctacgccaggcctacgaggatattgcgctgcat
ccgctgagtacgactgaagagtatgaagccatgttaatgcagtcgcaggcgggatacggt
cgctatttgcagctgctgcgcgagcgggccgagccggaggcgctgattgccgcctttggt
gaattccagctactgtgcgccctgcgcgacggcccttacggcgtcagcggggtgaatgaa
cagctggagcagatgcttaaccgtcggcgggcgataacgctgccgaggcattcacgctgg
tatgaagggcgtccggtgatgatttcgcgcaacgacagcgcgctggggctgtttaacggc
gatatcggtattgcgctggagcggggagaggggctgcgcgtctggttcccgatgccggat
ggcagcattaagtcggtgcagccaagtcgtttgccggagcacgacaccgcgtgggcgatg
acggtgcataaatcgcaggggtcggagttcgaccatgcggcgttgattctgcccgccaaa
atcgtcccgctggtcacccgcgagctggtatacaccgcaatcacgcgggcaaaacagcgg
ctctcgatttatgccgatgagcaggtgcttacccagtccatcgtcgcccgtaccgagcgg
cgcagcgggctggcagagattttcgccaaccgcacatag
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