Klebsiella electrica: electrica_00932
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Entry
electrica_00932 CDS
T06174
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
ree
Klebsiella electrica
Brite
KEGG Orthology (KO) [BR:
ree00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ree03009
]
electrica_00932 (rlmD)
Enzymes [BR:
ree01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
electrica_00932 (rlmD)
Ribosome biogenesis [BR:
ree03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
electrica_00932 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
RrnaAD
TRM5-TYW2_MTfase
PCMT
MTS
Cons_hypoth95
Methyltransf_11
PrmA
Methyltransf_23
Methyltransf_4
FtsJ
Methyltransf_15
TPMT
Methyltrans_SAM
Methyltr_RsmB-F
Motif
Other DBs
NCBI-ProteinID:
QDI07148
LinkDB
All DBs
Position
958382..959686
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AA seq
434 aa
AA seq
DB search
MAQFYSAKRRVTTRQIITVTVNDLDPFGQGVARHHGKALFIHGLLPQEQADVVVVEDKKQ
YSRAQVKRRLNDSPQRQAPRCPHFGTCGGCQQQHASVELQQQSKRAALARLMKRDVDDII
AASPWGYRRRARLSLNYQPKTSQLQMGFRQAGSSEIIDVVQCPILAPDLEALLPAVRECL
SGLKSTRQLGHVELVLADNGPLMVLRHTAALPAGDKEKLERFSQSHALALYLAPQSEKLE
HISGESPWYTSDGLRLMFSPRDFIQVNDGVNQLMVQTALAWLDIQPQDRVLDLFCGMGNF
TLPLATRAANVVGVEGVPALVEKGRENAALNQLHNVTFFHENLEEDVTRQAWAQHGFDKI
LLDPARAGAPGVMSHIIKLAPRRVVYVSCNPATLARDSDLLLQAGYKIQRLAMLDMFPHT
GHLESMVLFEHRDA
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaattctactctgcaaaacggcgtgtgacgacgcgccagatcataaccgttaca
gtcaatgacctcgatccctttggtcagggcgttgctcgtcaccatggtaaagcgctattt
attcatggcttattgccccaggaacaggctgacgttgtcgtggttgaagacaaaaaacag
tactcccgggcgcaggtcaaacgccgtcttaatgacagcccgcagcgccaggcgccgcgc
tgcccgcatttcggtacctgcggtggctgccagcaacagcatgccagcgtagagctccag
cagcaaagtaaacgcgccgcgcttgcccggctgatgaagcgcgatgttgacgacattata
gccgcttcgccgtggggatatcgtcggcgcgcacgtctgagcttgaattatcagccaaag
acctcacaattacagatgggctttcgtcaggctggctccagcgagataatcgacgtggtg
cagtgccccattctggcgcccgatcttgaggcattgctgccggcggtgcgcgagtgcttg
tccggcctgaaatcaacgcgtcagctcgggcatgtcgagctggtgctggcggacaatggc
ccgctgatggtcctgcgccacacggcagcattaccggccggcgataaagaaaaactggaa
cgattttcgcaatctcacgcactcgcgctgtacctggcgccgcaaagcgagaaactggaa
catattagcggggaatccccctggtatacttccgacgggctacgcttaatgtttagcccg
cgcgactttatccaggtgaacgatggcgtcaatcagctgatggtgcaaacggcgctggcg
tggctggatattcagcctcaggaccgggtgctcgatctgttctgcgggatggggaatttt
accctgccgctggctacgcgtgcggccaatgtcgtgggcgttgaaggcgtcccggcgctg
gttgagaaagggcgggaaaatgccgcgctcaatcagctgcacaacgtgacattctttcat
gaaaatctggaagaagatgtgacccgccaggcctgggcgcagcatggttttgataaaata
ttactcgacccggcgcgagccggggcgccgggcgtgatgtcacacattataaaacttgcc
ccgcgtcgcgtcgtctatgtctcctgtaatccggcgactctggcgcgcgatagcgacctg
ctgctgcaggcgggatataagattcaacgcctggcgatgctggacatgttcccgcacacc
ggacatctggaatcaatggtgttgtttgagcacagagatgcatag
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