Klebsiella electrica: electrica_04821
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Entry
electrica_04821 CDS
T06174
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ree
Klebsiella electrica
Pathway
ree03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ree00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
electrica_04821 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ree03021
]
electrica_04821 (rpoC)
03400 DNA repair and recombination proteins [BR:
ree03400
]
electrica_04821 (rpoC)
Enzymes [BR:
ree01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
electrica_04821 (rpoC)
Transcription machinery [BR:
ree03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
electrica_04821 (rpoC)
DNA repair and recombination proteins [BR:
ree03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
electrica_04821 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
QDI10837
LinkDB
All DBs
Position
complement(5014840..5019063)
Genome browser
AA seq
1407 aa
AA seq
DB search
MKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCAR
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPTAHIWFLKSL
PSRIGLLLDMPLRDIERVLYFESYVVIEGGMTNLERNQILTEEQYLDALEEFGDEFDAKM
GAEAIQALLKSMDLEQECEQLREELNETNSETKRKKLTKRIKLLEAFVQSGNKPEWMILT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPY
LRLHQCGLPKKMALELFKPFIYGKLELRGLATTIKAAKKMVEREEAVVWDILDEVIREHP
VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA
RALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTRDCVNAKGEGMVLTGPKEAERIYRAG
LASLHARVKVRITEYEKDENGQFVAKTSLKDTTVGRAILWMIVPKGLPFSIVNQALGKKA
ISKMLNTCYRILGLKPTVIFADQTMYTGFAYAARSGASVGIDDMVIPEKKHEIISEAEAE
VAEIQEQFQSGLVTAGERYNKVIDIWAAANDRVSKAMMDNLQTETVINRDGVEEQQVSFN
SIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVVTEDDCGTLEGITMTPVIEGGDVKEPLRDRVL
GRVTAEDVLKPGTADILVPRNTLLHEHWCDLLEENSVDSVKVRSVVSCDTDFGVCAHCYG
RDLARGHIINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNKGSIKL
SNAKSVVNSAGKLVVTSRNTELKLIDEFGRTKESYKVPYGAVMAKGDGEQVAGGETVANW
DPHTMPVISEVSGFIRFTDMIDGQTITRQTDELTGLSSLVVLDSAERTAGGKDLRPALKI
VDAQGNDVLIPGTDMPAQYFLPGKAIVQLEDGVQISAGDALARIPQESSGTKDITGGLPR
VADLFEARRPKEPAILAEISGIISFGKETKGKRRLVITPLDGSDPYEEMIPKWRQLNVFE
GERVERGDVVSDGPEAPHDILRLRGVHAVTRYITNEVQDVYRLQGVKINDKHIEVIVRQM
LRKATIESAGSSDFLEGEQVEYSRVKIANRDLEANGKVAATYSRDLLGITKASLATESFI
SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRMRRRAAGEQPA
APQVSVEEASANLAELLNAGLGGSDND
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagacttattaaagtttctgaaagcgcaaactaaaaccgaagagtttgatgcgatc
aaaattgctctggcctcgccagacatgatccgttcatggtcttttggtgaagttaaaaag
ccggaaaccatcaactaccgtacgttcaagcctgagcgtgacggccttttctgcgcccgt
atctttgggccggtaaaagattacgagtgcctgtgcggtaagtacaagcgcctgaaacac
cgtggtgttatctgtgagaagtgcggcgttgaagtgacccagaccaaagtgcgtcgtgag
cgcatgggccacatcgaactggcctctccgaccgcccacatttggttcctgaaatcgctg
ccgtcccgtatcggcctgctgctggatatgccgctgcgtgatatcgaacgcgttctgtac
ttcgaatcctatgtggttatcgaaggcgggatgaccaacctggaacgtaaccagatcctg
actgaagagcagtatctggatgcgctggaagagtttggtgacgaattcgatgcgaagatg
ggtgcggaagctattcaggccctgctgaaaagcatggatctggagcaagagtgcgagcag
ctgcgtgaagagctgaacgaaactaactccgaaaccaaacgtaaaaagctgaccaagcgt
atcaagctgctggaagcgttcgttcagtctggcaacaagccggagtggatgatcctgacc
gttctgccggttctgccgccagatctgcgcccgctggtaccgctggatggtggtcgtttc
gcgacttctgacctgaacgatctgtatcgtcgcgtcattaaccgtaacaaccgtctgaaa
cgtctgctggatctggctgcgccggatatcatcgtacgcaacgaaaaacgtatgctgcag
gaagcggtcgacgccctgctggataacggtcgtcgcggtcgtgcgatcaccggttctaac
aagcgtcctctgaaatctttggccgacatgatcaaaggtaagcagggtcgtttccgtcag
aacctgctcggtaagcgtgttgactactccggtcgttctgttatcaccgtaggtccatac
ctgcgtctgcatcagtgcggtctgccgaagaaaatggcgctggagctgttcaaaccgttc
atttacggcaagctggaactgcgtggcctcgccaccaccatcaaagccgcgaagaaaatg
gttgagcgcgaagaagctgtcgtttgggatatcctggacgaagttatccgcgaacacccg
gtactgctgaaccgtgcaccaaccctgcaccgtctgggtatccaggcatttgagccggta
ctgatcgaaggtaaagctatccagctgcacccgctggtttgtgcggcctataacgccgac
ttcgatggtgaccagatggctgttcacgtaccgctgacgctggaagcccagctcgaagcg
cgtgcgctgatgatgtctaccaacaacatcctgtctccggcgaacggcgagccaatcatc
gttccgtctcaggacgttgtactgggtctgtactacatgacccgtgactgtgttaacgcc
aaaggcgaaggcatggtgctgactggcccgaaagaagcggagcgtatttatcgcgccggt
ctggcctctctgcatgcgcgcgttaaagtgcgtatcaccgaatatgaaaaagatgaaaac
ggccagttcgttgcgaaaaccagcctgaaagacacgaccgttggccgtgcgattctgtgg
atgatcgtgccgaaaggtctgccgttctctatcgtgaaccaggcgctgggtaagaaagcc
atctctaagatgctgaatacctgctaccgtattctgggcctgaaaccgaccgttattttt
gcggaccagacgatgtacaccggctttgcttatgcagcgcgttcaggtgcatccgtgggt
atcgatgacatggtcatcccggagaaaaaacacgagatcatctctgaggcggaagccgaa
gttgctgagatccaggaacagttccagtccggtctggttaccgcgggcgaacgctataac
aaagttatcgatatctgggctgcggcgaacgatcgtgtatccaaagcgatgatggataac
ctgcaaaccgaaaccgtgattaaccgtgacggcgtcgaagagcagcaggtttccttcaac
agcatctacatgatggccgactccggtgcgcgtggttctgcggcacagattcgtcagctg
gcaggtatgcgtggtctgatggcgaagccggatggctccatcatcgaaacgccaatcacc
gcgaacttccgtgaaggtctgaacgtactccagtacttcatctctactcacggtgcgcgt
aaaggtctggcggataccgcactgaaaacagcgaactccggttacctgacccgtcgtctg
gttgacgttgcccaggatctggttgtcactgaagatgactgcggcaccctggaaggcatc
accatgaccccggttatcgagggtggcgatgttaaagagccgctgcgcgatcgcgtactg
ggtcgtgtgaccgctgaagacgttctgaagccgggtaccgcggacattctggttccacgc
aacacgctgctgcacgagcactggtgtgatctgctggaagagaactccgttgactccgtc
aaagtgcgttccgttgtatcctgtgacaccgactttggtgtatgtgcgcactgctacggt
cgtgacctggcgcgtggccacatcatcaacaaaggtgaagccatcggcgttatcgcggca
cagtccatcggtgagccgggtacacagctgacgatgcgtacgttccacatcggtggtgcg
gcatctcgtgcggctgctgaatccagcattcaggtgaaaaacaagggtagcatcaagctg
tctaacgccaagtcggttgtaaactccgctggcaagctggttgtgacctcgcgtaacacc
gagctgaagctgatcgacgaattcggtcgtaccaaagaaagctataaagtgccttacggt
gcggttatggcgaaaggcgatggcgagcaggttgccggcggtgaaaccgtggcaaactgg
gatccgcataccatgccggttatctctgaagtcagtggtttcatccgctttactgacatg
attgacggccagaccattactcgtcagaccgacgagctgaccggtctgtcttcgctggtg
gttctggattctgcagaacgtaccgcgggtggtaaagatctgcgtccggcgctgaaaatt
gttgatgcacagggcaacgatgttctgatcccgggtaccgatatgcctgctcagtacttc
ctgccgggcaaagcgattgtccagctggaagatggcgtacagatcagtgcgggtgacgct
ctggcacgtattccgcaggaatccagtggtaccaaggacatcaccggtggtctgccgcgc
gttgcggatctgttcgaagcacgtcgtccgaaagagccggctatcctggcggaaatcagc
ggtatcatttccttcggtaaagaaaccaaaggcaaacgtcgtctggttatcactccgtta
gacggcagcgatccgtacgaagagatgattccgaaatggcgtcagctgaacgtgttcgaa
ggtgaacgtgtagaacgtggtgatgtggtttccgacggtccggaagctccgcacgacatt
ctgcgtcttcgtggcgtacacgcggtaacgcgttatatcaccaacgaagtgcaggacgtt
taccgtctgcaaggcgttaagattaacgataagcacatcgaagttatcgttcgtcagatg
ctgcgtaaagcgaccatcgaaagcgcaggtagctccgacttcctggaaggcgaacaggtt
gaatactcccgcgtcaagattgctaaccgcgatctggaagcgaatggcaaagtggcggcg
acttactcccgcgacctgctgggtatcaccaaagcgtctctggcaaccgagtcgttcatc
tctgccgcatcgttccaggagaccacacgtgtcctgaccgaagcagccgttgcgggcaaa
cgcgacgaactgcgcggcctgaaagagaacgttatcgtcggtcgtctgatcccggcgggt
accggctatgcgtaccaccaggatcgtatgcgtcgccgcgccgcgggcgaacagcctgca
gcacctcaggtgagcgtggaagaagcttctgctaacctggcagaactgctgaacgcaggt
ctgggcggttccgacaacgattaa
DBGET
integrated database retrieval system
