Cupriavidus necator H16: H16_A0059
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Entry
H16_A0059 CDS
T00416
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
reh
Cupriavidus necator H16
Brite
KEGG Orthology (KO) [BR:
reh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
reh03009
]
H16_A0059 (dbpA)
Enzymes [BR:
reh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
H16_A0059 (dbpA)
Ribosome biogenesis [BR:
reh03009
]
Prokaryotic type
rRNA helicases
H16_A0059 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_22
P-loop_SecA
CMS1
ERCC3_RAD25_C
YjeF_N
Motif
Other DBs
NCBI-ProteinID:
CAJ91211
UniProt:
Q0KFL0
LinkDB
All DBs
Position
1:72999..74408
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AA seq
469 aa
AA seq
DB search
MNSTPAQPQAGTAFSNLPLSPTMLATLAQLGYDEMTPIQAASLPITLAGQDLVAQAKTGS
GKTAAFGLALLHRLDPRRFDVQAMVLCPTRELADQVTQEIRRLARAEENIKVLTLCGGSP
MRPQVDSLIHGAHIVVGTPGRILDHIDRGSLDLSGINTLVLDEADRMLDMGFFDDIAYVA
SRCPKDRQTLLFSATYPPGIDKLSHRFLRNPQSVKLEATHDNTTIRQRFYEVEEGERLNT
VGRLLDHFRPVSTLAFCNTKARCRELVELLRAQGYQALALHGELEQRERDQVLVQFANRS
CSVLVATDVAARGLDIAQLEAVINVEITPDPEVHVHRIGRTGRADQEGWAFSLVSMDEMG
RVGNLEQHHGGEFEWQPLADLRPASNERLLPPMVTLQMLGGRKEKIRPGDILGALTGEAG
FTKEQIGKINVLEMSTYIAVERSIGREAVKRLNAGKVKGKKVKVRMLTE
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgaactcgacccccgcccagccgcaagccggcaccgctttttccaacctgccgctgtcg
cccaccatgctcgccacgctggcgcagcttggctatgacgaaatgacgccgatccaggcg
gccagcctgccgatcacattggcaggccaggacctggtggcgcaggccaagaccggcagc
ggcaagaccgccgccttcgggctggcgctgctgcaccggctcgatccgcgccgcttcgat
gtgcaggcgatggtgctgtgccccacgcgcgagctggccgaccaggtcacgcaggaaatc
cgccgcctggcgcgcgccgaagagaacatcaaggtgctgacactgtgcggcggctcgccg
atgcggccgcaggtcgacagcctgatccatggcgcacatatcgtggtgggcacgcccggc
cgcatcctggatcacatcgaccgcggcagcctggatctgtccggcatcaacacgctggtg
ctggacgaggccgaccgcatgctcgacatgggcttcttcgacgacatcgcctatgtggcc
agccgctgcccgaaggaccggcagacgctgctgttctcggccacgtatccgcccggcatc
gacaagctcagccaccgtttcctgcgcaacccgcagtcggtcaagctggaggctacgcac
gacaacaccaccatccgccagcgcttctatgaggtcgaggaaggcgagcgcctgaacacg
gtggggcgcctgctggaccacttccgcccggtcagcacgctggccttctgcaataccaag
gcgcgctgccgcgagctggtggaactgctgcgcgcgcagggctaccaggcgctggcgctg
cacggcgaactggagcagcgcgagcgcgaccaggtgctggtgcagtttgccaaccgcagc
tgctcggtgctggtggcaaccgacgtggccgcgcgcgggctggatatcgcgcagctcgag
gccgtgatcaatgtcgagatcacgcccgatcctgaggtgcacgtgcaccgcatcggccgc
accggccgcgccgaccaggaaggctgggccttcagcctggtcagcatggacgagatgggc
cgcgtgggcaacctggaacagcaccacggcggcgaattcgaatggcagccgctggccgac
ctgaggcccgccagcaatgaacgcctgctgccgccgatggtgaccttgcagatgctgggt
ggccgcaaggagaagatccgccccggcgacatcctgggcgcgctcaccggcgaggcaggc
ttcaccaaggagcagatcggcaagatcaatgtgctggagatgtcgacctatatcgcggtg
gagcgcagcatcgggcgcgaggcggtgaagcggctcaatgccggcaaggtcaagggcaag
aaggtgaaggtgcggatgctgacggagtga
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