Cupriavidus necator H16: H16_A0400
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Entry
H16_A0400 CDS
T00416
Symbol
uvrA1
Name
(GenBank) Excinuclease ABC, ATPase subunit (A)
KO
K03701
excinuclease ABC subunit A
Organism
reh
Cupriavidus necator H16
Pathway
reh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
reh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H16_A0400 (uvrA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
reh03400
]
H16_A0400 (uvrA1)
DNA repair and recombination proteins [BR:
reh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H16_A0400 (uvrA1)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
H16_A0400 (uvrA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
AAA_23
AAA_21
nSTAND1
DnaJ_CXXCXGXG
RsgA_GTPase
nSTAND3
AAA_25
cobW
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
CAJ91550
UniProt:
Q0KEM1
LinkDB
All DBs
Position
1:complement(416981..419842)
Genome browser
AA seq
953 aa
AA seq
DB search
MEEIKIRGARTHNLKNINLDLPRNRLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLQLMEKPDVDLIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLYARAGTPYC
PDHNLPLQAQSVSQMVDAALALPEDTKLMILAPVVADRKGEHSDLFDSMQAQGFVRFRIR
SGGGTAHEAEAKVYEVDALPKLKKTEKHTIEVVVDRVKVRADIKQRLAESFETALRLADG
RALALELDSGKEHMFSSKFACPICSYSLQELEPRLFSFNNPMGACPSCDGLGQITFFDPK
RVVAFPNLSLASGAIKGWDRRNQFYFQMLQGLAAYYDFDTETPFEELPENVQQSVLHGSG
EQEIPFTYINERGRTTVREHVFEGIIPNLERRYRETDSVAVREELAKYQNNQPCPACQGT
RLRTEARHVKLGEGEQARAIFEINGWPLRDALTYFLTLDMHGAKREIGDKIIKEISARLN
FLNNVGLDYLSLERSADTLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLI
GTLKHLRDIGNSVLVVEHDEDMIRACDYVVDIGPGAGVHGGMIVAEGTPRQIEESPASLT
GQYLSGQRRIEVPKERAAPDDERLLRIVNASGNNLRNVTAEVPVGLLTCITGVSGSGKST
LINDTLYHAVARHLYGSTPEPAPHDRIEGLEHFDKVINVDQSPIGRTPRSNPATYTGLFT
PIRELFAGVPSAKERGYDPGRFSFNVKGGRCESCQGDGVLKVEMHFLPDVYVPCDVCHGK
RYNRETLEVLYKGKNISEVLDLTVEQAHEFFSAVPVVRRKLQTLLDVGLGYIRLGQSATT
LSGGEAQRVKLSLELSKRDTGRTLYILDEPTTGLHFHDIELLLKVIHKLRDQGNTVVIIE
HNLDVIKTADWLIDMGPEGGAGGGQVIARGTPEDVARSKASFTGKYLKPLLER
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaatcaagatccgtggggcgcgtacccacaacctgaagaacatcaatctcgac
ctgccgcgcaaccggctgatcgtgatcaccggcctgtcgggctcgggcaagtcctcgctt
gccttcgacacgctctatgccgagggccagcgccgctacgtggagtctctgtccgcctat
gcccgccagttcctgcagctgatggaaaagccggacgtggacctgatcgaaggcctgtcg
ccggcgatctcgatcgagcagaaggccaccagccacaacccgcgttcgactgtcggcacc
gtcaccgagatccacgactacctgcgcctgctgtacgcccgcgccggcacgccctactgc
cccgaccacaacctgccgctgcaagcgcagagcgtgtcgcagatggtggacgccgcgctg
gcgctgcccgaggacaccaagctgatgatcctggcgccagtggtggccgaccgcaagggc
gagcattcggacctgttcgacagcatgcaggcgcagggcttcgtgcgctttcgcatccgc
tcgggcggcggcaccgcgcacgaggccgaggccaaggtctatgaggtcgatgcgctgccg
aaactgaagaagaccgagaagcacaccattgaagtggtggtggaccgcgtcaaggtgcgc
gccgacatcaagcagcgcctggccgaatcgttcgagaccgcgttgcgcctagccgatggc
cgcgcgcttgcgctggaactcgacagcggcaaggagcatatgttcagctccaagtttgcc
tgcccgatctgctcgtactcgctgcaggagctggagccgcggctgttctcgttcaacaac
ccgatgggcgcctgccctagctgcgacgggctgggccagatcaccttcttcgatcccaag
cgcgtggtggccttccccaacctgtcgctggcctcgggcgcgatcaagggctgggaccgc
cgcaaccagttctacttccagatgctgcaaggcctggcagcgtactacgacttcgacacc
gagaccccgttcgaggagttgccggaaaacgtgcagcagtcggtgctgcacggctcgggc
gagcaggaaatcccgttcacctatatcaacgaacgcggccgcaccaccgtgcgcgagcat
gtgttcgaagggatcatccccaacctggagcgccgctaccgcgaaaccgattcggtcgcc
gtgcgcgaggaactggccaagtaccagaacaaccagccctgccccgcctgccaaggcacc
cgcctgcgcaccgaggcgcgccacgtcaagctgggcgagggcgagcaggcacgcgcgatc
ttcgagatcaacggctggccgctgcgcgacgcgctgacctacttcctgacgctggacatg
cacggcgccaaacgcgagatcggcgacaagatcatcaaggagatctcggcgcggctgaac
ttcctgaacaacgtcgggctggactacctgtcactggagcgcagcgccgatacgctgtcg
ggcggcgaggcccagcgcatccggctggcgtcgcagatcggctcgggtctgaccggcgtg
atgtatgtgctggacgagccctcgatcggcctgcaccagcgcgacaacgaccgtctgatc
ggcacgctcaagcacctgcgcgacatcggcaactcggtgctggtggtcgagcacgacgag
gacatgatccgcgcctgcgattacgtggtcgacatcggcccgggcgccggcgtgcacggc
ggcatgatcgtggccgagggcacgccgcggcagatcgaggagtcgccggcatcgctgacc
ggccagtacctgtccggccagcgccgcatcgaggtgccgaaggagcgcgccgcgcccgac
gatgagcgcctgctgcgcatcgtcaacgccagcggcaacaacctgcgcaacgtcaccgcc
gaagtgccggtgggcctgctgacctgcatcaccggcgtgtccggctcgggcaagtcgacg
ctgatcaacgacacgctctaccatgcggtggcgcgccacctgtacggctcgacgccggag
ccggcgccgcacgaccgcatcgaggggctcgagcatttcgacaaggtcatcaacgtcgac
cagagcccgatcggacgcacgccgcgttccaatccggccacctatacgggcctgttcacg
cccatccgcgaactgttcgccggcgtgccgtcggcaaaggagcgcggctacgacccgggc
cgcttctcgttcaacgtcaagggcgggcgctgcgaatcgtgccagggcgacggcgtgctc
aaggtcgagatgcacttcctgcccgacgtctatgtgccgtgcgatgtctgccacggcaag
cgctacaaccgcgagacgctggaagtcctgtacaagggcaagaacatctccgaggtgctg
gacctgaccgtcgagcaggcgcacgagttcttcagcgcggtgccggtggtgcggcgcaag
ctgcagacgctgctggacgtgggcctgggctatatccggctgggccagtcggcgaccacg
ctgtcgggcggcgaggcgcagcgcgtcaagctgtcgctggagctgtccaagcgcgacacc
gggcgcacgctctatatcctggacgagcccaccaccgggctgcacttccacgatatcgag
ctgctgctcaaggtcatccacaagctgcgcgaccagggcaataccgtggtcatcatcgaa
cacaacctcgatgtcatcaagaccgcggactggctgatcgacatggggccggaaggcggc
gccggtggcggccaggtgatcgcgcgcggcacgccggaggatgtggccaggagcaaggcg
agctttacgggcaagtatctgaagccattgctggagcggtaa
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