Cupriavidus necator H16: H16_A0531
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Entry
H16_A0531 CDS
T00416
Symbol
rhlE1
Name
(GenBank) ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
reh
Cupriavidus necator H16
Pathway
reh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
reh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H16_A0531 (rhlE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
reh03019
]
H16_A0531 (rhlE1)
Enzymes [BR:
reh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
H16_A0531 (rhlE1)
Messenger RNA biogenesis [BR:
reh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H16_A0531 (rhlE1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
CAJ91681
UniProt:
Q0KE90
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All DBs
Position
1:558370..559932
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AA seq
520 aa
AA seq
DB search
MSFSELGLSDKIVRAVAEQGYTTPTPIQAQAIPAILKGGDLLAGAQTGTGKTAGFTLPML
QLLSDSAARGANGAQRPARLPVRALVLTPTRELAAQVEESVRNYGKYLRLRSMVMFGGVG
INPQIEQLKRGVEIVVATPGRLLDHVSQRTIDLSQVELLVLDEADRMLDMGFIHDIRKIL
NVLPAKRQNLLFSATFSDDIRALADRLLNNPASIEVARRNTTAETVDQRVYPVDRERKRE
LLAHLVRQHDWHQVLVFTRTKHGANRLAEQLTKDGLSALAIHGNKSQSARTRALSEFKSG
TLRLLVATDIAARGIDIDQLPHVVNFDLPNVPEDYVHRIGRTGRAGAEGEAISLVCVDEI
ALLRDIERLIKRKLEQTVLPGFEVDPSIAPEPIQKGRQQRGGGGQGQGQGQGRGRAQARP
AGNEGEGAQRQRPAREAQAAPRQAQGGQRGNGAANGNRGGQPAGGARNPAPRRDGQEPAR
QQRAAAQPARQPHDAAPAPARNRRPAPQAALLGGNRKPAR
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgtctttttctgaactcggcttgtccgacaagattgtgcgtgccgtggccgaacagggc
tacaccacgccgactcccatccaggcccaggcgatccccgccatcctcaagggcggcgac
ctgctcgccggcgcgcagaccggcaccggcaagaccgccggctttacgctgccgatgctg
cagctgctgtccgactccgcggcgcgcggcgccaatggcgcgcagcgtccggcccgcctg
ccggtgcgcgcactggtgctgacgcccacgcgcgaactggccgcccaggtcgaggagagc
gtgcgcaactacggcaagtacctgcgcctgcgctcgatggtgatgttcggcggcgtcggc
atcaatccgcagatcgagcagctcaagcgcggcgtcgagatcgtggtggccacgcccggc
cgcctgctggaccacgtgtcccagcgcaccatcgacctgtcgcaggtggaactgctggtg
ctggacgaagccgaccgcatgctcgacatgggcttcatccacgatatccgcaagatcctc
aacgtgctgccggccaagcgccagaacctgctgttctcggcgacgttctccgacgacatc
cgcgcgctggcagaccgcctgctgaacaacccggcctcgatcgaggtggcgcggcgcaat
accacggccgagaccgtggaccagcgcgtctacccggtggatcgcgagcgcaagcgtgaa
ctgctggcccacctggtgcgtcagcatgactggcaccaggtgctggtgttcacccgcacc
aagcacggcgccaaccgcctggccgagcagctgaccaaggacggcctgtcggcactggcg
atccatggcaacaagagccagtcggcgcgcacgcgcgcgctgtcggaattcaagtccggc
acgctgcggctgctggtggcaaccgatatcgccgcgcgcggcatcgatatcgaccagctg
ccgcacgtggtcaatttcgacctgcccaacgtgcccgaggactatgtgcaccgcatcggc
cgcactggccgcgccggcgccgagggcgaagcgatctcgctggtctgcgtggacgagatt
gcgctgctgcgcgatatcgaacgcctgatcaagcgcaagctcgagcagactgtgctgccg
ggcttcgaggtcgacccgagcatcgcacccgagccgatccagaagggtcgccaacagcgt
ggcggtggtggccaggggcaaggacaaggccagggccgcggacgcgcccaggcgcgtccg
gccggcaacgaaggtgagggcgcccagcgccagcgcccggcgcgcgaagcgcaggctgcg
ccgcggcaagcccagggcggccagcgcggcaacggtgcagccaacggcaaccgtggcggc
cagcccgccggcggcgcgcgcaatcccgcaccgcgccgcgacggccaggagccggcgcgc
cagcaacgggccgcggcgcaacccgcgcgccagccgcacgacgcggccccggcaccggcg
cgcaatcgccgtccggcgccgcaggccgcgctgctcggcggcaaccgcaagccggcgcgc
tga
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