Cupriavidus necator H16: H16_A1152
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Entry
H16_A1152 CDS
T00416
Symbol
uvrB
Name
(GenBank) Excinuclease ABC, helicase subunit (B)
KO
K03702
excinuclease ABC subunit B
Organism
reh
Cupriavidus necator H16
Pathway
reh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
reh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H16_A1152 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
reh03400
]
H16_A1152 (uvrB)
DNA repair and recombination proteins [BR:
reh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H16_A1152 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
H16_A1152 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_16
Kinesin
DUF8849
Motif
Other DBs
NCBI-ProteinID:
CAJ92293
UniProt:
Q0KCH8
LinkDB
All DBs
Position
1:1254410..1256494
Genome browser
AA seq
694 aa
AA seq
DB search
MSNLAEAAPALDEDKFVTFPGSPFQLYQPFPPAGDQPEAIRQLVEGVEDGLSFQTLLGVT
GSGKTFTMANVIARMGRPAIVFAPNKTLAAQLYAEFREFFPRNAVEYFVSYYDYYQPEAY
VPQRDLFIEKDSSINEHIEQMRLSATKSLLERRDTIIVATVSAIYGIGNPTEYHQMILTL
RAGDKISQRDVIARLIAMQYTRNETDFQRGTFRVRGDTIDIFPAEHAEMAVRLEMFDDEV
ESLQFFDPLTGRVRQKIPRFTVYPSSHYVTPRETVLRAIEAIKSELRERLEFFHKENRLV
EAQRLEQRTRFDLEMLSELGFCKGIENYSRHLSGAKPGEPPPTLVDYLPPDALMFLDESH
VLIGQLNGMYNGDRARKTTLVEYGFRLPSALDNRPLKFDEFERKMRQVMFVSATPAQFEQ
DNAGQVVEQVVRPTGLVDPIIMVRPATTQVDDLLSEIHARVEVGERVLVTTLTKRMAEQL
TEFLSENGVKVRYLHSDIDTVERVEIIRDLRLGTFDVLVGINLLREGLDIPEVSLVAILD
ADKEGFLRAERSLIQTIGRAARNVNGTAILYADRMTESMKKAIGETERRRAKQIAFNEAN
GITPRGVVKRIKDIIDGVYSVNDARAELLAAQEQARYEDMSEKQVSKEIRRLEKLMLDHA
RNLEFEQAAQVRDQLAKLKAQVFGASGEGALPPA
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaccttgcagaagccgcgccggccctggacgaagacaaattcgtcacattcccc
ggctccccgttccagctctaccagccgttcccgcccgccggcgaccagccggaggccatc
cggcaactggtggagggggtcgaggacggcctgtcgttccagacgctgctgggggtgacg
ggttcgggcaagaccttcaccatggccaatgtgatcgcccggatgggacggccggcgatc
gtgttcgcgcccaacaagacgctggcggcccagctctacgccgagtttcgcgagttcttc
ccgcgcaacgcggtcgagtacttcgtcagctactacgattactaccagcccgaggcctac
gtcccgcagcgcgacctgtttatcgagaaggactcgtcgatcaacgagcatatcgagcag
atgcggctgtcggcgaccaagagcctgctggagcgccgcgacacgatcatcgtggcgacc
gtctctgcgatctacggtatcggcaacccgaccgaataccaccagatgattctcaccttg
cgggccggcgacaagatcagccagcgcgatgtgatcgcgcgcctgatcgcgatgcagtac
acccgcaacgagaccgatttccagcgcggcaccttccgcgtgcgcggcgacaccatcgac
atcttcccggccgagcatgccgagatggcggtgcggctggagatgttcgacgacgaagtc
gagtcgctgcagttcttcgacccgctgactggccgcgtgcgccagaagatcccgcgcttc
acggtctatccgtcgagccactatgtgaccccgcgcgagaccgtgctgcgcgcgatcgag
gcgatcaagtcggagctgcgcgagcggctggagttcttccacaaggaaaaccggctggtg
gaggcgcagcggcttgagcagcgcacccgcttcgacctggaaatgctgtccgagctgggc
ttctgcaagggcatcgagaactattcgcggcacctgtccggcgcgaagccgggcgagccg
ccgccgacgctggtcgactacctgccgcccgacgcgctgatgttcctggacgagtcgcac
gtgctgatcggccagctcaacggcatgtacaacggcgaccgcgcgcgcaagaccacgctg
gtggagtacggcttccggctgccctcggcgctggacaaccggccgctgaagttcgacgaa
ttcgagcgcaagatgcgccaggtgatgtttgtttcggccacgccggcgcagttcgagcag
gacaatgccgggcaggtggtggagcaggtggtgcgtccgaccgggctggtcgatcccatc
atcatggtgcgcccggcgaccacgcaggtggatgacctgctatcggaaatccacgcccgc
gtggaggttggcgaacgcgtgctggtgaccacgctgaccaagcgcatggccgagcagctg
accgagttcctgtccgagaacggcgtcaaggtgcgctacctgcactcggacatcgacacg
gtcgagcgcgtggagatcatccgcgacctgcgcctgggcaccttcgacgtgctggtgggc
atcaacctgctgcgcgaaggcctggatattcccgaggtgtcgctggtggcgatcctcgat
gcggacaaggaaggcttcctgcgcgccgagcgctcgctgatccagaccatcgggcgcgcc
gcgcgcaacgtcaacggtaccgcgatcctgtacgcggaccgcatgaccgagtcgatgaag
aaggcgattggagagaccgagcgccgccgtgccaagcagatcgccttcaacgaggccaac
ggcatcacgccgcgcggcgtggtcaagcgcatcaaggacattatcgacggcgtctatagc
gtcaacgatgccagggccgagctgctggcggcgcaggagcaggcccgctacgaggacatg
agcgagaagcaggtctccaaggaaatcaggcgtttggagaagctcatgctcgatcacgcc
cgcaacctggagttcgagcaggcggcgcaggtgcgcgaccagctggccaagctcaaggcg
caggtgttcggcgccagtggagagggcgcgctgccgcctgcctga
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