Cupriavidus necator H16: H16_A1171
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Entry
H16_A1171 CDS
T00416
Symbol
cJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
reh
Cupriavidus necator H16
Pathway
reh03410
Base excision repair
reh03430
Mismatch repair
reh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
reh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H16_A1171 (cJ)
03430 Mismatch repair
H16_A1171 (cJ)
03440 Homologous recombination
H16_A1171 (cJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
reh03400
]
H16_A1171 (cJ)
DNA repair and recombination proteins [BR:
reh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
H16_A1171 (cJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
H16_A1171 (cJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
H16_A1171 (cJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
RecJ_OB
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
CAJ92312
UniProt:
Q0KCF9
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All DBs
Position
1:complement(1271600..1273297)
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AA seq
565 aa
AA seq
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MTRIAIRQYSPEHASSLAAAGLHPTLARILAARGVARAAELATDLPELVPPAAMKGIGHA
AAYLADAIAAGKRLLIVADYDCDGATACAVGVRGLRMLGARVEYIVPNRFEYGYGLTPEI
VALAARQQPDVIVTVDNGIASVDGVAAANALGIDVVVTDHHLPGSELPQAAVIVNPNQPG
CEFPSKNLAGVGVMFYVLLALRAELRQRGVYTQATQPPLQTLLDLVALGTVADVVKLDTN
NRILVAQGLRRMRAGRMQPGVAALFRAAGREAARANTFDLGFGLGPRLNAAGRLADMSLG
IECLLTEDANRAWEIAQELDSMNRERRDIEAGMQQEALQILEQPLAGPDPSARFTVSVFN
DTWHQGVIGIVASRLKDKFHRPTITFAPGDETTVKGSGRSIPGFHLRDALDLVSKRHPGM
LLKFGGHAMAAGLTVRAERFAEFQEAFEAVGREWLTDDQLARVIETDGDIEDQCFSPEFV
TLLEQQVWGQGFPAPTFCGEFDVLRQSVLKGKHLKLQLGRGSQRLDAIWFNHADSLGASA
QVAYRLDNNTFNGVTRVQLVIEHAQ
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgacccggatcgccatccgccaatactctcccgaacacgccagctcgctggcggccgcc
ggcctgcaccccacgctggcgcgcatcctggccgcgcgcggcgtggcgcgcgcggccgag
ctggccaccgacctgcccgaactggtgccgcccgcggccatgaagggcatcggccacgcc
gcagcctacctggccgacgccatcgccgccggcaagcgcctgctgatcgtggccgactat
gactgcgacggcgccaccgcctgcgcggtgggcgtgcgcgggctgcgcatgctgggcgcg
cgggtggaatacatcgtgccgaaccgcttcgagtacggctacggcctgaccccggagatc
gtggcgctggcggccaggcagcagccggacgtgatcgtcacggtcgacaacggcatcgcc
agcgtcgacggggtggctgcggccaatgcgctgggcatcgacgtggtggtgaccgaccac
cacctgccggggtcggagctgccgcaggccgcggtgatcgtcaacccgaaccagccgggc
tgcgaattccccagcaagaacctggcgggcgtgggcgtgatgttctacgtgctgctggcg
ctgcgcgccgaactgcgccagcgcggcgtctatacccaggccacgcagccgccgctgcag
acgctgctggacctggtggcgctgggcacggtggccgacgtggtcaagctggataccaac
aaccgcatcctggtggcacagggcctgcgccgcatgcgcgcaggacggatgcagccgggc
gtggcggcgctgttccgcgccgccgggcgcgaggcggcgcgcgccaataccttcgacctg
ggtttcgggctgggtccgcgcctgaacgcggccggccggctggcggacatgtcgctgggc
attgaatgcctgctgacggaagatgccaaccgcgcatgggagatcgcgcaggagctggac
agcatgaaccgcgagcggcgcgacatcgaggccggcatgcagcaggaggcgctgcagatc
ctggagcagccgctggccggcccggacccctcagcgcgcttcaccgtcagcgtgttcaac
gacacctggcaccagggcgtgatcggcatcgtggcgtcgcgtctgaaagacaagttccac
cgccccaccatcaccttcgccccgggcgacgagaccaccgtcaagggctcgggccgctcg
atccccggcttccacctgcgcgatgcgcttgacctggtgtccaagcgccatcccggcatg
ctgctcaagttcggcggccacgccatggcggccgggctgaccgtgcgcgccgagcgtttt
gccgagttccaggaggccttcgaggcggtcggccgcgaatggctgaccgacgaccagctg
gcgcgcgtgatcgagaccgatggcgatatcgaggaccagtgcttcagcccggaattcgtc
accctgctggagcagcaggtatggggccagggcttcccagcgccgaccttctgcggcgag
ttcgacgtgctgcgccagagcgtgctcaagggcaagcacctgaagctgcagctcgggcgc
ggcagccagcgcctcgacgcgatctggttcaaccatgccgactcgctcggcgccagcgca
caggtggcctaccggctcgacaacaacaccttcaacggcgtcacccgcgtgcagctggtg
atcgaacacgcgcagtag
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