KEGG   Cupriavidus necator H16: H16_A1171
Entry
H16_A1171         CDS       T00416                                 
Symbol
cJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
reh  Cupriavidus necator H16
Pathway
reh03410  Base excision repair
reh03430  Mismatch repair
reh03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:reh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    H16_A1171 (cJ)
   03430 Mismatch repair
    H16_A1171 (cJ)
   03440 Homologous recombination
    H16_A1171 (cJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:reh03400]
    H16_A1171 (cJ)
DNA repair and recombination proteins [BR:reh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     H16_A1171 (cJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     H16_A1171 (cJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      H16_A1171 (cJ)
SSDB
Motif
Pfam: DHHA1 DHH RecJ_OB Glyco_transf_4
Other DBs
NCBI-ProteinID: CAJ92312
UniProt: Q0KCF9
LinkDB
Position
1:complement(1271600..1273297)
AA seq 565 aa
MTRIAIRQYSPEHASSLAAAGLHPTLARILAARGVARAAELATDLPELVPPAAMKGIGHA
AAYLADAIAAGKRLLIVADYDCDGATACAVGVRGLRMLGARVEYIVPNRFEYGYGLTPEI
VALAARQQPDVIVTVDNGIASVDGVAAANALGIDVVVTDHHLPGSELPQAAVIVNPNQPG
CEFPSKNLAGVGVMFYVLLALRAELRQRGVYTQATQPPLQTLLDLVALGTVADVVKLDTN
NRILVAQGLRRMRAGRMQPGVAALFRAAGREAARANTFDLGFGLGPRLNAAGRLADMSLG
IECLLTEDANRAWEIAQELDSMNRERRDIEAGMQQEALQILEQPLAGPDPSARFTVSVFN
DTWHQGVIGIVASRLKDKFHRPTITFAPGDETTVKGSGRSIPGFHLRDALDLVSKRHPGM
LLKFGGHAMAAGLTVRAERFAEFQEAFEAVGREWLTDDQLARVIETDGDIEDQCFSPEFV
TLLEQQVWGQGFPAPTFCGEFDVLRQSVLKGKHLKLQLGRGSQRLDAIWFNHADSLGASA
QVAYRLDNNTFNGVTRVQLVIEHAQ
NT seq 1698 nt   +upstreamnt  +downstreamnt
atgacccggatcgccatccgccaatactctcccgaacacgccagctcgctggcggccgcc
ggcctgcaccccacgctggcgcgcatcctggccgcgcgcggcgtggcgcgcgcggccgag
ctggccaccgacctgcccgaactggtgccgcccgcggccatgaagggcatcggccacgcc
gcagcctacctggccgacgccatcgccgccggcaagcgcctgctgatcgtggccgactat
gactgcgacggcgccaccgcctgcgcggtgggcgtgcgcgggctgcgcatgctgggcgcg
cgggtggaatacatcgtgccgaaccgcttcgagtacggctacggcctgaccccggagatc
gtggcgctggcggccaggcagcagccggacgtgatcgtcacggtcgacaacggcatcgcc
agcgtcgacggggtggctgcggccaatgcgctgggcatcgacgtggtggtgaccgaccac
cacctgccggggtcggagctgccgcaggccgcggtgatcgtcaacccgaaccagccgggc
tgcgaattccccagcaagaacctggcgggcgtgggcgtgatgttctacgtgctgctggcg
ctgcgcgccgaactgcgccagcgcggcgtctatacccaggccacgcagccgccgctgcag
acgctgctggacctggtggcgctgggcacggtggccgacgtggtcaagctggataccaac
aaccgcatcctggtggcacagggcctgcgccgcatgcgcgcaggacggatgcagccgggc
gtggcggcgctgttccgcgccgccgggcgcgaggcggcgcgcgccaataccttcgacctg
ggtttcgggctgggtccgcgcctgaacgcggccggccggctggcggacatgtcgctgggc
attgaatgcctgctgacggaagatgccaaccgcgcatgggagatcgcgcaggagctggac
agcatgaaccgcgagcggcgcgacatcgaggccggcatgcagcaggaggcgctgcagatc
ctggagcagccgctggccggcccggacccctcagcgcgcttcaccgtcagcgtgttcaac
gacacctggcaccagggcgtgatcggcatcgtggcgtcgcgtctgaaagacaagttccac
cgccccaccatcaccttcgccccgggcgacgagaccaccgtcaagggctcgggccgctcg
atccccggcttccacctgcgcgatgcgcttgacctggtgtccaagcgccatcccggcatg
ctgctcaagttcggcggccacgccatggcggccgggctgaccgtgcgcgccgagcgtttt
gccgagttccaggaggccttcgaggcggtcggccgcgaatggctgaccgacgaccagctg
gcgcgcgtgatcgagaccgatggcgatatcgaggaccagtgcttcagcccggaattcgtc
accctgctggagcagcaggtatggggccagggcttcccagcgccgaccttctgcggcgag
ttcgacgtgctgcgccagagcgtgctcaagggcaagcacctgaagctgcagctcgggcgc
ggcagccagcgcctcgacgcgatctggttcaaccatgccgactcgctcggcgccagcgca
caggtggcctaccggctcgacaacaacaccttcaacggcgtcacccgcgtgcagctggtg
atcgaacacgcgcagtag

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