Cupriavidus necator H16: H16_A2309
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Entry
H16_A2309 CDS
T00416
Symbol
h16_A2309
Name
(GenBank) Predicted 16S rRNA uridine-516 pseudouridylate synthase or related pseudouridylate synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
reh
Cupriavidus necator H16
Brite
KEGG Orthology (KO) [BR:
reh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
reh03009
]
H16_A2309 (h16_A2309)
Enzymes [BR:
reh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
H16_A2309 (h16_A2309)
Ribosome biogenesis [BR:
reh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
H16_A2309 (h16_A2309)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
CAJ93405
UniProt:
Q0K9B6
LinkDB
All DBs
Position
1:complement(2504571..2506460)
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AA seq
629 aa
AA seq
DB search
MQHPIVNILSDSVEQDTRNAGAPADTGAAEPGSGSEAAPRRKGLRRGLRNLVASRRQAQD
RGEGAEGAGGQADAGEAGAAQAAGGARGGQRGRGKRKTGQGEGGQGSQGGQGTSKAEKVD
RAARAEGTDKPEQPGRKRKPVQRSGKAAAPGEAQGAGARQQGRRKDGGKPQAPRKGQGGG
DKTTASSEDLFRFVISEQYDNEDTVIPRTKAKPVRELSADDDAPKLHKVLAEGGLGSRRE
MEELILQGRVSVNGLPAHIGQRILPADQVRVNGKLIHRKVSTKPPRVLLYHKPAGEIVSQ
SDPEGRPTVFDSLPRIKTGKWVAVGRLDFNTEGLLIFTTSGDIANRFMHPRYGVEREYAV
RTLGELAEADRQRLLHGIKLDDGEANFLRIADGGGEGVNQWYHVALTEGRNREVRRMFEA
VGLTVSRLIRTRYGQFLLPRGLKRGRWQEVEPNDVKALMAGVGLKVPGKGEQAPKGATKV
GGRKQRTEAAIAGMPMPTGMDGLPRFDQGGARGGSGGRSSQPDPMKTSMGYITHGPTLLT
SHAASLGGGRGTGARQGRGGAGMGGMGGMRGQGGQGGLGGQGQGKPRRGGGEANGNVMPK
ASKPGGNRSPRGGSGGGGGNRGGNRGGNR
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgcaacatccgatagtgaatatcttgtctgattccgttgagcaagacacccgcaatgcg
ggcgcacccgccgacaccggcgccgcagaacccggatcgggcagcgaagccgcgccccgc
cgcaaggggctgcgccgcgggctgaggaacctggtcgcatcgcgccgccaggcacaggac
cgcggcgagggcgccgaaggcgccggcggccaggccgatgccggtgaagcgggcgccgca
caggcggcgggcggtgcgcgcggtggccagcgtggccgcggcaagcgcaagacggggcag
ggcgagggtggccagggtagccaaggcggccagggcaccagcaaggcagaaaaggtcgac
cgtgcggccagggccgaaggcaccgacaagcctgagcagcccggccgcaagcgcaagccg
gtccagcgctcaggcaaggcggcagcgccgggcgaggcgcagggtgccggtgcgcggcag
cagggccgccgcaaggatggcggcaagccgcaggcgccccgcaagggccagggcggcggg
gacaagaccacggcgagcagcgaagacctgttccgcttcgtgatctctgagcagtacgac
aacgaagacaccgtcattccgcgcaccaaggccaagccggtgcgcgagctgtcggccgac
gacgacgcgcccaagctgcacaaggtgctggccgagggcgggctgggctcgcgccgcgag
atggaagaactgatcctgcagggccgcgtttcggtcaacggcctgccggcccatatcggc
cagcgcatcctgccggcggaccaggtccgcgtgaacggcaagctgatccaccgcaaggtg
tcgaccaagccgccgcgcgtgctgctgtaccacaagcccgccggcgagatcgtcagccag
tccgatccggaaggccgtccgactgtgttcgacagcctgccgcgcatcaagaccggcaag
tgggtcgcggtgggccgcctggacttcaatactgaaggcctgctgatcttcaccacctct
ggtgatattgccaaccgtttcatgcatccgcgctatggcgtggagcgcgagtacgcggtg
cgcacgctgggcgagctggccgaggccgaccgccagcgcctgctgcatggcatcaagctc
gatgacggcgaggccaatttcctgcgcattgccgacggcggcggtgaaggcgtcaaccag
tggtaccacgtggccctgaccgaaggccgcaaccgtgaagtgcgccgcatgttcgaggcg
gtcgggctgaccgtgtcgcgcctgatccgcacccgctacggccagttcctgctgccgcgt
ggcctcaagcgcggccgctggcaggaagtcgagcccaatgacgtcaaggcgctgatggcc
ggtgtcggcctgaaggtgcccggcaagggcgagcaggctcccaagggcgccaccaaggta
ggcgggcgcaagcagcgcaccgaagccgcgattgccggcatgccgatgcccacgggcatg
gacggcctgccgcgcttcgaccagggcggcgcccggggcggtagcggcggccgcagcagc
cagccggatccgatgaagacctcgatgggctatatcacccacgggcccaccttgctgacc
tcgcacgcggccagcctgggcggcgggcgcggcactggcgcacgccagggacgtggtggc
gccggcatgggcggcatgggtggcatgcgcggtcagggtggtcagggcggcctgggtggc
cagggtcagggcaagccgcgtcgcggcggcggcgaagccaacggcaatgtgatgccgaag
gcgtcgaagccgggcggcaaccgttccccgcgcggcggtagtggcggtggcggcggcaac
cgtggtggcaaccgcggcggcaaccgataa
DBGET
integrated database retrieval system
