Cupriavidus necator H16: H16_A2389
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Entry
H16_A2389 CDS
T00416
Symbol
dnaX
Name
(GenBank) DNA polymerase III tau/gamma subunit
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
reh
Cupriavidus necator H16
Pathway
reh03030
DNA replication
reh03430
Mismatch repair
reh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
reh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H16_A2389 (dnaX)
03430 Mismatch repair
H16_A2389 (dnaX)
03440 Homologous recombination
H16_A2389 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
reh03032
]
H16_A2389 (dnaX)
03400 DNA repair and recombination proteins [BR:
reh03400
]
H16_A2389 (dnaX)
Enzymes [BR:
reh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H16_A2389 (dnaX)
DNA replication proteins [BR:
reh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
H16_A2389 (dnaX)
DNA repair and recombination proteins [BR:
reh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
H16_A2389 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
DNA_pol3_tau_5
AAA_16
RuvB_N
AAA_18
AAA_22
AAA_14
AAA_30
AAA_5
AAA_2
TsaE
nSTAND3
AAA_28
Mg_chelatase
AAA_19
Herpes_Helicase
AAA_24
Motif
Other DBs
NCBI-ProteinID:
CAJ93484
UniProt:
Q0K937
LinkDB
All DBs
Position
1:complement(2594524..2596878)
Genome browser
AA seq
784 aa
AA seq
DB search
MANKDREVGAAAAGGGLHFATIAAMSYQVLARKWRPRDFTTLVGQEHVVRALTHALEQQR
LHHAYLFTGTRGVGKTTLSRILAKALNCTGPDGNGGITAQPCGQCKACQEIDSGRFVDYI
EMDAASNRGVDEMAQLLDKAVYAPTSGRFKVYMIDEVHMLTNHAFNAMLKTLEEPPGHVK
FILATTDPQKIPVTVLSRCLQFNLKQMPPGHIVSHLDHILAQEGIGHDGNALRLLAQAAH
GSMRDALSLTDQAIAYSAGQVSEDAVRGMLGAIDQGYLVQLLDALAAEDGAAMLAIADAM
ADRSLSFAGALQDLGSLLHKVALAQAVPASVQDEWPEADEVRRLAGVFDAQEVQLFYQIA
NLGRSELALAPDEYAGFTMTLLRMLAFRPSSEPTTAQGQGGGAAPARQRGAEAAQTVDTR
HATAVANAAEQAKAGAAAAPVPAPMPARAVQPVAVAEPAAAPAAVPASPEAAPARPAAGA
GNGAMSPAAAALAAARQASAARGGGRKAPPPAMAPAPAAAQRPPAQPLRAPGAAAVSRPP
APVAKAPMQSPAAPARPAARQAEPESVPPWELAGGSDVPPWEELPPDLPVIGPYDSDPGY
RDNGFNEPAARAAGPRRAPAREAEPARETAPVQPAAAPAESAKFVAPRPPAAGEDGTPPA
FTGEWPVLAAGLPLKGLAQQLAYQSELTQVVGRTFHLRIPVAALGENGVSERLQQALCDH
FGEPVRVVCEVGGVSITAAAADAEARAERQRQAEAVIEADPFVQGLLRDFGGQIVPGSIQ
PRAA
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaataaagaccgcgaggtcggggcggcggcggccggaggggggctgcattttgct
acaatcgccgccatgagttatcaagttctagcgcgcaaatggcgccccagggatttcacc
acgctggtcggccaggagcacgtggtccgcgcgctcacgcacgcgctggaacagcagcgg
ctgcaccatgcctacctgttcaccggcacgcgcggggtcggcaagaccacgctgtcgcgg
atcctggccaaggccctgaactgcaccggccctgacggcaacggcggcatcaccgcccag
ccgtgcgggcagtgcaaggcctgccaggagatcgacagcggccgcttcgtcgactacatc
gagatggacgccgcctccaaccgcggcgtcgacgagatggcgcagctgctggacaaggcg
gtctacgccccgacctccgggcgcttcaaggtctacatgatcgacgaagtgcatatgctc
accaaccacgccttcaacgccatgctgaagacgctggaagagccgcccgggcacgtcaag
ttcattctcgccaccaccgatccgcagaagattccggtcacggtgctgtcgcgctgcctg
cagttcaacctcaagcagatgccgccggggcatatcgtctcgcacctggaccatattctg
gcgcaggaaggcatcggccacgacggcaatgcgctgcgcctgctggcccaggccgcgcac
ggctcgatgcgcgatgcgctgtcgctgaccgaccaggccatcgcctacagcgcgggccag
gtctcggaagacgcggtgcgcggcatgctgggcgcgatcgaccagggctacctggtgcag
ttgctcgatgcgctggccgccgaggacggcgccgccatgctggcgattgccgatgccatg
gccgaccgcagcctgtcgtttgccggcgcgctgcaggacctgggctcgctgctgcacaag
gtggcgctggcgcaggccgtgccggcctcggtgcaggacgaatggcccgaagccgatgag
gtgcggcgcctggccggggtgttcgacgcgcaggaagtgcagctgttctaccagatcgcc
aacctcggccgcagcgagctggcgctcgcgccggacgagtacgccggcttcaccatgacg
ctgctgcgcatgctggcgttccggccgtcgtctgaacccactacggcgcaagggcagggc
ggtggtgccgcgcctgcgcgccagcgtggtgccgaagccgcgcaaaccgttgatacccgc
catgcgacggctgtggccaatgccgccgaacaggccaaggccggtgctgcggcggccccg
gtccctgcccctatgcccgcacgggcggtccagcccgtggcagtggctgaacccgctgcc
gcacctgccgctgtccctgcatcccctgaagctgcgccggcacggccggccgctggcgcc
ggcaacggggccatgtcgcccgccgccgccgcgctggcggccgcccgccaggcttccgct
gcccgtgggggcggccgcaaggcgccgccgccggccatggcgccagcgccggctgccgcg
cagcgcccgccggcccaacccttgcgcgcgcccggcgcggcagccgtgagtcggccgccg
gcaccggttgcgaaggcgcccatgcagtcgccggcagcgccggcacggcccgccgcgcgc
caggcggagccggaatccgtgccgccctgggagctggcgggtggcagcgatgtgccgccg
tgggaagagctgccgcctgacctgccggtcatcggcccctatgacagcgatcctggctac
cgcgacaacggtttcaacgaaccggcagcgcgtgccgccgggccgcgccgggcgcccgcg
cgcgaggccgagccggcgcgcgagaccgctccggtgcagccagccgcggcgccggcagag
tccgccaagttcgtcgccccgcgcccgccagcagcgggcgaggatggcaccccgccggcc
ttcaccggcgaatggccggtgctggccgccggcctgcccttgaagggcctggcgcagcag
ctggcctaccagagcgaactgacccaggtggtcggacgtaccttccacctgcgcatcccg
gtcgcggccctgggcgagaacggcgtgtccgagcggctgcagcaggcgctgtgcgaccac
ttcggcgagccggtgcgcgtggtctgcgaagtcggcggggtttccatcacggccgcggcc
gccgatgccgaggcgcgcgccgagcgccagcgccaagccgaggccgtgatcgaggccgat
ccctttgtccagggcctgctgcgcgattttggcggccagatcgtgccgggctcgatccag
ccgcgcgccgcctga
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