Cupriavidus necator H16: H16_A2391
Help
Entry
H16_A2391 CDS
T00416
Symbol
cB
Name
(GenBank) ATP-dependent exoDNAse (exonuclease V) beta subunit
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
reh
Cupriavidus necator H16
Brite
KEGG Orthology (KO) [BR:
reh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
reh03400
]
H16_A2391 (cB)
Enzymes [BR:
reh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H16_A2391 (cB)
DNA repair and recombination proteins [BR:
reh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
H16_A2391 (cB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
PDDEXK_1
AAA_22
AAA_30
Motif
Other DBs
NCBI-ProteinID:
CAJ93486
UniProt:
Q0K935
LinkDB
All DBs
Position
1:complement(2599836..2603438)
Genome browser
AA seq
1200 aa
AA seq
DB search
MTPHDPHHVQPYQRDGEPVSEAEFTRAACDPARSVVVEACAGSGKTWLLVARLVRLLLAG
AAPHEILAITFTRKAAEEMRDRLLEVLAQMSRDSDEDVVAALVQRGLTHDAAREALPRAR
RLHAQVLAAPGRMAIDTFHGWFGTLLRGAPLASGIVPGAALREDALRMKREAWAPVWRAL
ATEQYTDLRAAWETLVDTVGDFQARALLDAMFHARSEWWAMQEGGDPLQALSDCLGEDAR
GDVLLQALSDEGWRDACESLALRLGAAGKTEQTHAARITDALMAITAWREAGAAPGKPAE
RAFAQLRAAFFTTTGGPRSLRRTAALVKAAGGEGMVDALLDEHASICAMLDDISARCCEA
AVLAINRALFCIGDALLTRYQRHKDEQRAMDFADLEWQAARLMSDEETATYLQVRLDARY
RHLLLDEFQDTNPLQWRILQGWLAGYAGLGERPTVFLVGDPKQSIYRFRRADARLFGAAG
EMLRDTFGATVLRTNRTRRNRAEVLDWVNAVFDTARAEGRYPLYATQTTALAGGNGPVWL
LPLVEPEDKAEDAVDDGAEDKSAEAASAHRDTLLQPRRQAGDSLRLEEGRRVAAWLRLVR
DTVPVHEGGEQRPARWSDMHLLVRRKTHLADYERALREAGIPCLSPRRGGLLATLEALDL
SALLAFLMTPESDLDLAHVLKSPLVGASDDDLLALARIEGEGGWWARIESGGLPEHVSDA
LREGVQRLRQWLRVAPHRPVHDLIDQIFHGGEVRRRYAEAAPPDIREQVLANLDAFLKLS
LDLDGGRYPSLPKFIDELQEIRRGDEGESPDEGGMGESAEDVEPAEDDSAFAGLDAVHIL
TVHAAKGLEAPFVVLLDANHSEPAADRGGILVDWPPSSPVPRHFSAYGKRSERGLARAPL
FEAEAALGERENWNLLYVAMTRAQQGLLVSGVKGRASRSGSGEGNAEIAGSWYVRLQAAG
VGEMVPAYPGELADAQDQAPMPARLSEPVRFTDFRLRYRDAVDARQGIGFEEEGEAEDEP
DGIVFNAAAARHGELVHALLERLTRYPEAFAGVPGIDTVLRWFPLTGAHTGAARQAWRQQ
VAQALEAVAAMLRAPALAPLLGAGDARSARNEVELYDARGRLLRIDRLVEFDDRVVIVDY
KLRLLPQEHEAYRAQLGRYAAALAPMFPGKRIEAGVATADGEWIPAERLAPPMPQQGSLF
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgacgccccacgatccgcaccacgtccagccttaccagcgcgacggcgagcccgtttcc
gaggccgagttcacgcgcgccgcctgcgatcccgcgcgctcggtggtggtagaggcctgt
gccggcagcggcaagacctggctgctggtggcgcggctggtgcgcctgctgctggccggc
gccgcgccgcacgagatcctggccatcaccttcacgcgcaaggccgccgaagaaatgcgc
gaccgcctgctggaggtgctggcacagatgtcgcgcgacagcgatgaagacgtggtcgca
gcgctggtgcagcgcggcctgacgcatgacgccgcgcgcgaggcgctgccgcgtgcgcgg
cgcctgcatgcgcaggtgctggccgcgcccgggcgcatggccatcgataccttccacggc
tggttcggcacgctgctgcgtggcgcgccgctggcctcgggcatcgtgccgggcgcggcg
ctgcgcgaagatgcgctgcgcatgaaacgcgaagcttgggccccggtctggcgcgcgctg
gccacggagcaatacaccgacttgcgcgccgcgtgggaaacgctggtcgataccgtgggc
gacttccaggcacgcgcgctgctggacgcgatgttccatgcccgcagcgaatggtgggcg
atgcaggagggcggcgacccgctgcaggcgctgtccgactgcctgggcgaagacgcccgg
ggcgacgtgctgctgcaggcgctgtccgacgaaggctggcgcgatgcctgcgagtcgctg
gcgctgcgcctgggcgcggccggcaagactgagcagacccacgccgcccgcatcaccgat
gcgctgatggcgatcaccgcgtggcgcgaagcgggcgcggcgcccggcaagcccgccgaa
cgggcgttcgcgcagttgcgcgccgcgttcttcaccaccaccggcggcccgcgttcgctg
cggcgcaccgcggcgctggtcaaggccgccggcggcgaaggcatggtcgatgcgttgctg
gacgagcatgcctcgatctgcgccatgcttgacgacatcagcgcgcgttgttgcgaagcc
gcggtgctggcgatcaaccgcgcgctgttctgcatcggcgatgccttgctgacgcgctac
cagcggcacaaggacgagcagcgcgcgatggacttcgccgacctggaatggcaggccgcg
cgcctgatgtcggacgaagagaccgccacgtacctgcaggtgcggctggacgcgcgttac
cgccatctgctgctcgacgagttccaggacaccaacccgctgcagtggcgcatcctgcag
ggctggctggccggctatgcgggcctgggcgagcgcccgacggtgttcctggtgggcgat
cccaagcagtcgatctaccgcttccggcgcgccgatgcacggctgttcggcgcggccggc
gagatgctgcgcgatacgttcggcgccaccgtgctgcgcaccaaccgcacccggcgcaac
cgtgccgaagtgctggactgggtcaacgccgtgttcgacaccgcacgcgccgagggccgc
tatccgctgtacgcgacccagaccacggcactggccggaggcaacgggccggtctggctg
ctgccgctggtggagcccgaggacaaggccgaagacgccgttgacgatggtgcagaggac
aagtccgccgaagccgcctccgcccatcgcgacacgctgctgcagccacgccggcaggcc
ggcgattcgctgcggctggaagagggccggcgcgtggccgcgtggctgcgcctggtgcgc
gacaccgtgccggtccatgagggcggcgaacagcgccccgcgcgctggagcgacatgcat
ctgctggtgcgccgcaagacccatctggctgactatgagcgcgcgctgcgcgaggccggc
atcccgtgcctgagcccgcgccgcggcggcctgctggccacgctcgaggcgctggacctg
tcggcgttgctggcgttcctgatgacgccggaatcggacctggatctcgcgcacgtgctg
aagagcccgctggtgggagcgtcagacgacgacctgctggcgctggcccggatcgaaggc
gagggcggctggtgggcacgcatcgagtcaggcggcctgcccgaacacgtatccgatgcg
ctgcgcgaaggcgtgcagcgcttgcgccagtggttgcgcgtcgcgccgcaccggccggtg
catgacctgattgaccagatcttccacggcggcgaagtgcggcgccgttatgccgaggcc
gcgccgccggatatccgcgaacaggtgctggccaacctcgacgccttcctgaagctgtcg
cttgacctcgacggcgggcgctatccgagcctgccgaaatttatcgacgagctgcaggaa
atccgccgcggcgacgagggcgaaagccccgatgaaggcggcatgggcgagagcgccgaa
gacgtggagccggccgaggacgattcggcgtttgccggcctcgacgcggtccatatcctg
accgtgcatgcggccaagggcctggaggcgccgttcgtggtgctgctcgatgccaaccac
agtgagccggccgcggaccggggcggcatcctggtcgactggccgccgtcgtcgccggtg
cctcggcatttctcggcctacggcaagcgcagcgagcgcgggctggcgcgggcgccgttg
ttcgaggcggaggcggcgctgggcgagcgcgagaactggaacctgctgtacgtggccatg
acgcgcgcgcagcagggcctgctggtcagcggggtcaagggccgtgccagccgcagcggt
tcgggcgagggcaatgccgagatcgccggcagttggtatgtgcggctgcaggccgcaggc
gtcggcgagatggtgccggcctatccgggcgagctggccgatgcgcaggaccaggctccg
atgcccgcgcgcctgagcgagccggtgcgctttaccgacttccggctgcgctatcgcgat
gcggtggatgcgcggcaggggatcgggtttgaagaagagggcgaggccgaagacgagccc
gacggcatcgtcttcaacgctgcggccgcccgccacggcgagctggtgcatgccttgctg
gaacgcctgacgcgctatcccgaagcctttgccggcgtgccggggatcgacaccgtattg
cgctggttcccgctgacgggcgcgcacaccggggcggcacggcaggcgtggcggcaacag
gtggcgcaagcgctggaggcggtggctgcgatgctgcgcgcgccggcactggcgccgttg
ctgggggcgggggacgcccgcagcgcgcgcaatgaagtcgaactctatgacgcgcgcggc
aggctgctgcgtatcgaccggctggtggagttcgacgaccgcgtggtgatcgtcgactac
aagctgcggctcctgccgcaggagcatgaagcctaccgcgcgcagctgggccgctatgcg
gccgcgcttgcgccgatgttcccgggcaagcgtatcgaggccggcgtggccaccgcggac
ggcgaatggattcccgccgagcgtctggcgccgccgatgccgcagcagggctcgctgttc
tga
DBGET
integrated database retrieval system
