Cupriavidus necator H16: H16_A2392
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Entry
H16_A2392 CDS
T00416
Symbol
addB
Name
(GenBank) two domain protein: Inactivated superfamily I helicase and RecB family exonuclease
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
reh
Cupriavidus necator H16
Brite
KEGG Orthology (KO) [BR:
reh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
reh03400
]
H16_A2392 (addB)
Enzymes [BR:
reh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H16_A2392 (addB)
DNA repair and recombination proteins [BR:
reh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
H16_A2392 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
CAJ93487
UniProt:
Q0K934
LinkDB
All DBs
Position
1:complement(2603435..2606302)
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AA seq
955 aa
AA seq
DB search
MTSLRFRPGPDFLDQAATAAWYFLDRCGAPEAGAHVVVPTAAQIPGVRQALDAAARASGS
PRLLPRVLTLGHWLLDLPPEGAPVRSPAARLLAVQQAVRGQDWLRRAFGAQNETAAWGLS
QTLLSICDELNARWLEDAAIRDDDEIDGDDRAGLLQGALERTYSHLSERFLGEEARIVLA
FWQALSGPDDPLPARRRALRELSQQLRGPVIWIAPTPPTPLEAAFLRDAAELVPVLQVGY
DWTGQGGSDADWYQTLLALWPEARIVDDAEAVAPAPAMPALPPQRPSIRVVGSARFEDEA
AAAAAQLVQWLNEGRRQVALVAHDRVVARRARALLARAGAPVRDETGWKLSTTRAAAALM
RWFDLLVRDGDTAALLDLLKSPFCLPEVAGRGAAIALLERQVRREGITGGWARLRQLFGH
APTAAQQAATEDEGAAEAPRHAAHALIAVLADEAARWPRGLAQHPLATWLERLDGMLDGL
GMRAALAADDAGSQLLDALARLQELPLDETGGHATLSQGEFRAMLSALLESVAYKEPSAS
GPARITILPLNGARMRRFEGVVIVGCDDAQLPSSAAELMFFSNQMRRELDLEDREARFAQ
QARDLAEVLLNNDDVVLTWQRYGSRGEPHHVSGWIERLAACCARAGVSIEASAAAQAHET
FADPQGMPAPAAEPALVPVRWSAQAYNMLRRCPYQFFAGRMLGLAGLETVSDELEKREIG
EHLHHVLLRYHKDLQARRERGETLAEDRRLARLAEISEAVFGALMAEDGNAIAYYRRWRE
VMPSYVAWQSAREAEGWFWRGGELDAGIDLPMPDGQPLRLTGRIDRLDQGPGGAHAVLDY
KTQSATRLKRKLAEVGEDCQLPFYGLLRADAAAGSWVSLEGAREGAAAAQREVGLPDFEA
AVIWLERQMRDDVMRLRQGARLPAFGDASACLYCTARGLCRKGFWESTAVPALTS
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgctacgtttccgccctggccctgatttcctcgaccaggcggccaccgctgcc
tggtatttcctcgaccgctgcggcgcgccggaggcgggcgcgcacgtggtcgtgcccacc
gcggcgcagatcccgggcgtgcgccaggcactggacgccgccgcgcgcgcgtcgggcagc
ccgcggctgctgccgcgcgtgctgacgctgggccactggctgctcgacctgccgcccgag
ggcgccccggtgcgcagcccggccgcacgcctgctggccgtgcagcaggcggtgcgcggg
caggattggctgcgccgcgccttcggcgcccagaacgagaccgccgcatggggcctgtcg
cagacgctgctgtcgatctgcgacgagcttaacgcgcgctggctcgaagacgccgccatc
cgcgacgatgacgagatcgacggcgacgatcgcgccggcctgctgcagggcgcgctggaa
cggacctattcgcatctgtccgagcgcttcctcggcgaagaggcgcgcatcgtgctggca
ttctggcaggcgctgtccggcccggacgatccgctgccggcgcggcgccgcgccttgcgc
gagctgtcgcagcagctgcgcggcccggtgatctggattgccccgaccccgcccacgccg
cttgaagccgcgttcctgcgcgatgccgccgagctggtgccggtgctgcaggtcggctat
gactggaccgggcagggcgggagcgatgccgactggtaccagaccctgctggcgctatgg
ccggaagcaaggatcgtcgatgatgccgaagccgtcgcccccgcgccggccatgcctgcg
ctgccgccgcagcgtccgtcgatccgcgtggtcggcagcgcgcgcttcgaggatgaagcc
gccgcggcagccgcgcagctggtgcagtggctcaatgaaggccgccgccaggtggcgctg
gtcgcgcacgaccgcgtggtggcgcggcgcgcccgtgccctgctggcgcgcgccggcgca
ccggtgcgcgacgagaccggctggaagctttccaccacgcgcgcggccgccgcgctgatg
cgctggttcgacctgttggtgcgcgacggcgacaccgccgcgctgctggacctgctcaag
agcccgttctgcctgccggaggttgccgggcgcggcgcggccatcgcgctgctggagcgc
caggtgcggcgcgagggcatcaccggcggctgggcgcgcctgcgccagctgttcggccac
gcaccgaccgcggcgcagcaagctgccacggaagacgagggtgccgccgaagcgccgcgc
cacgccgcgcacgcgctcatcgccgtgctcgccgacgaggcggcgcgctggccgcgcggc
ctcgcgcagcatccgctggcaacctggctggaacggctcgacggcatgctcgacggcctc
ggcatgcgcgcagcgctggccgcggacgatgccggcagccagctgctcgatgcgctggcg
cggctgcaggagttgccgctggacgagaccggcggccatgccacgctgtcgcagggcgag
ttccgcgcgatgctgtcggcgctgctggaatcggtcgcctacaaggagccctcggccagc
ggcccggcgcgcatcaccatcctgccgctgaacggcgcgcgcatgcgccgcttcgagggc
gtggtgatcgttggctgcgatgacgcgcaactgccgtccagcgccgccgagctgatgttc
ttctccaaccagatgcggcgcgagctggacctggaagaccgcgaggcccgctttgcgcaa
caggcgcgcgacctggccgaggtgctgctgaacaacgacgacgtggtgctgacctggcaa
cgctacggcagccgcggcgagccgcatcatgtgtcgggctggatcgagcgcctggcggcg
tgctgcgcgcgcgcgggcgtcagcatcgaagcctccgccgcagcacaggcgcacgagacc
tttgccgatccgcagggcatgccggcgccggcggcggagcccgcgctggtgccggtgcgc
tggagcgcgcaggcctacaacatgctgcgccgctgcccctaccagttcttcgccggccgc
atgctgggcctggccgggttggagacagtcagcgacgagctggagaaacgcgagatcggc
gaacacctgcaccacgtgctgctgcgctaccacaaggacctgcaggcgcgccgcgagcgt
ggcgagacgctggcggaagaccggcgcctggcccgcctggccgagatttccgaagccgtg
ttcggcgcgctgatggccgaggacggcaatgccattgcctactaccggcgctggcgcgag
gtgatgccgtcgtatgtcgcctggcaatccgcgcgcgaggccgagggctggttctggcgc
ggcggcgagctcgacgccggcatcgacctgccgatgcccgacggccagccgctgcgcctg
accgggcgcatcgaccggcttgaccagggcccgggcggggcgcatgccgtgctcgactac
aagacgcagagcgccacccgcctcaagcgcaagctggccgaggtcggggaagactgccag
ctgccgttctacggcctgctgcgcgccgatgcggcagcgggcagctgggtatcgctcgaa
ggcgcgcgcgagggcgcagcggcggcgcagcgcgaagtcggcctgcccgattttgaagcc
gccgtcatctggctggaacggcagatgcgcgacgacgtcatgcgcctgcgccagggtgcc
aggctgccggccttcggcgatgcctccgcctgcctgtattgcaccgcccgcggcctgtgc
cgcaagggcttctgggaatccaccgccgtgccggcgctgacatcatga
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