Cupriavidus necator H16: H16_A2616
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Entry
H16_A2616 CDS
T00416
Symbol
truA1
Name
(GenBank) transfer RNA-pseudouridine synthase I
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
reh
Cupriavidus necator H16
Brite
KEGG Orthology (KO) [BR:
reh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
reh03016
]
H16_A2616 (truA1)
Enzymes [BR:
reh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
H16_A2616 (truA1)
Transfer RNA biogenesis [BR:
reh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
H16_A2616 (truA1)
Prokaryotic type
H16_A2616 (truA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
CAJ93698
UniProt:
Q0K8H3
A0AAE6DGY7
LinkDB
All DBs
Position
1:complement(2823055..2823873)
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AA seq
272 aa
AA seq
DB search
MNRIALGLHYDGAAFSGWQSQPHRNTVQDHLENAIERFAGVRLLTTVAGRTDTGVHALGQ
VIHLDTALEREPFSWVRGVNAFLPPSIALQWALPVDQGFHARFLAFERMYYYALYTGPHR
VPLVHGRAGYQMLPPGQRLDVDAMREAAACLLGEHDFSAFRAAECQAKSPVKTMYDVTIR
DDGNWVFLRFRASAFLHHMVRNLMGCLVAVGRGRYPAHWLAQVLAGRERKLAAPTFMPDG
LYLVGVKYPDPYQIPAADPSASLFHGVFDDAA
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcatcgctcttggcctgcactacgacggcgccgccttttccggctggcagtcg
cagccgcaccgcaataccgtgcaggatcacctggaaaacgccatcgagcgttttgccggg
gtgcgcctgctgaccaccgtggcggggcgcaccgataccggcgtgcatgcgctcggccag
gtcatccacctggacaccgcgctcgagcgcgagccattttcctgggtgcgcggcgtcaac
gccttcctgccgccgtcgatcgcgctgcaatgggcgctgccggtggaccagggtttccac
gcgcgtttcctggcgttcgagcgcatgtattactacgcgctctacaccgggccacaccgc
gtgccgctggtgcacggccgcgccggctaccagatgctgccgccgggccagcggctcgac
gtcgacgccatgcgcgaggccgccgcatgcctgctcggcgagcatgatttctccgccttc
cgcgccgccgaatgccaggccaagtcgccggtcaagaccatgtacgacgtcaccatcagg
gatgacggcaactgggtgttcctgcgctttcgcgccagcgccttcctgcaccacatggtg
cgcaacctgatgggctgcctggtggcggtggggcgcggacgctaccccgcgcactggctg
gcgcaggtgctggccgggcgcgagcgcaagctggcggcgccgaccttcatgccggacggc
ctctacctggtcggcgtcaagtatcctgatccttaccagatccccgcggccgatccgtcc
gcgagcctgttccatggagtgttcgatgacgcagcctga
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