Cupriavidus necator H16: H16_A2741
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Entry
H16_A2741 CDS
T00416
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
reh
Cupriavidus necator H16
Pathway
reh03030
DNA replication
reh03410
Base excision repair
reh03420
Nucleotide excision repair
reh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
reh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H16_A2741 (polA)
03410 Base excision repair
H16_A2741 (polA)
03420 Nucleotide excision repair
H16_A2741 (polA)
03440 Homologous recombination
H16_A2741 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
reh03032
]
H16_A2741 (polA)
03400 DNA repair and recombination proteins [BR:
reh03400
]
H16_A2741 (polA)
Enzymes [BR:
reh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H16_A2741 (polA)
DNA replication proteins [BR:
reh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
H16_A2741 (polA)
DNA repair and recombination proteins [BR:
reh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
H16_A2741 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H16_A2741 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
CAJ93820
UniProt:
Q0K851
LinkDB
All DBs
Position
1:complement(2960846..2963662)
Genome browser
AA seq
938 aa
AA seq
DB search
MSDSPKTLLLVDGSSYLYRAYHALPDLRNGEGLPTGAIYGMINMLRKLRNDYPAEYSACV
FDAKGKTFRDDMYPAYKEHRPSMPEDLARQIEPIHEAVRAMGWPIVVVDGVEADDVIGTL
SRQATEQGVRTVVSTGDKDLAQLVNDQVTLVNTMSGEVLDPPGVVAKFGVPPERIIDYLS
LIGDAVDNVPGVPKVGPKTAVKWLAEHGSLDGVIAAAPGIKGVVGENLRNTLDWLPMARQ
LVTVKTDCDLSAAVADFHALRETGEDKDKLVAFFSRYGFKTWLREATGESLPDARAQARA
RAAAAPAQGGLFDVPATAGAAEAPAADQAAPTEIRYDTVSTEAQLEDWMRRIEAAPLVAI
DTETTSLDPMQAQLVGISLSVEPGVACYIPVAHRGPDVAGLPDHGQLSREFVLGRMRAWL
EDASRPKLGQNLKYDVHVFANHGVKLRGVAHDTMLQSYVLASHRNHGMDSLAERLLSLKT
ITYEEVCGKGASQIGFDQIDLARATEYAAEDADVTLRLHRKMFPQVEAAAGLRRVYEEIE
MPVSVVLQKVERNGVLIDAERLAAQSAELGQRMLALEQAAYEAAGQPFNLGSPKQIGEIL
FSQMKLPVVKKTASGAPSTDEEVLQKLAEDYPLPKLLLDYRGLAKLKSTYTDKLPKMVNP
QTGRVHTSYGQATAVTGRLASTEPNLQNIPVRTEEGRRIREAFIAEPGSVIVSADYSQIE
LRIMAHISGDENLLRAFANGEDIHRATAGEIFGVEREAVSSEQRRYAKVINFGLIYGMSA
FGLAGNLGIEREAAKHYIDRYFMRYPGVAHYMEETRQTAREQGYVETVFGRRLWLPDING
GSGPRRQAAERAAINAPMQGTAADLIKLSMIAVQGWLERDGLQTRQIMQVHDELVLEVPE
HELELVKVRLPELMCSVAQLRVPLVAEVGSGANWEEAH
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatagtccaaaaacactcttgctcgtcgatggatcgagctatctgtatcgcgct
tatcacgctctgccggacctgaggaatggggagggtctgcccacaggggcaatctacggc
atgatcaacatgctgcgcaagttgcgcaacgactacccggcagagtatagcgcctgcgtg
ttcgacgccaagggcaagaccttccgcgacgacatgtatccggcctacaaggaacatcgc
ccgtcgatgccggaagacctggcgcgccagatcgagccgatccatgaggccgtgcgcgcc
atgggctggccgatcgtggtggttgatggcgtggaggccgacgacgtgatcggcacgctg
tcgcgccaggccacggagcagggcgtgcgcacggtggtgtccaccggcgacaaggacctg
gcgcagctggtcaacgaccaggtcacgctggtcaacaccatgagcggcgaggtgctcgat
ccccctggcgtggttgccaagttcggcgtgccgcccgagcgcatcatcgactacctgtcg
ctgatcggtgatgcggtcgacaacgtgccgggcgtgcccaaggtgggccccaagaccgcg
gtcaaatggctggccgagcatggctcgctcgacggcgtgatcgccgccgcccccggcatc
aagggcgtggtcggcgagaacctgcgcaatacgctggactggctgccgatggcgcgccag
ctggtcacggtcaagaccgactgcgacctctccgccgcggtggcggacttccacgcgctg
cgcgaaacgggcgaggacaaggacaagctggtggcgtttttctcgcgctacggcttcaag
acctggctgcgcgaagcgaccggcgaaagcctgcccgatgcccgcgcccaggcccgcgcc
cgcgcggccgccgcgccggcgcaaggcggcctgttcgatgtgccggccacggccggcgca
gccgaggcaccggcagcggaccaggccgcgccgaccgagatccgctacgacacggtcagc
accgaagcccagctggaagactggatgcggcgcatcgaggccgcgccgctggtggccatc
gacaccgagaccacctcgctggacccgatgcaggcgcagctggtcggcatctcgctgtcg
gtcgagccgggcgtagcctgctatatcccggtggcgcaccgtggcccggacgtggccggg
ctgcccgaccacggccagctgtcgcgcgagttcgtgctggggcgcatgcgcgcatggctg
gaagatgccagccgcccgaagctgggccagaacctcaagtacgacgtccatgtctttgcc
aaccatggcgtgaagctgcgcggcgtggcgcacgacaccatgctgcagagctacgtgctg
gcctcgcatcgcaaccatggcatggacagcctggccgagcgcctgctgagcctgaagacc
atcacctatgaagaggtgtgcggcaagggcgccagccagatcggcttcgaccagatcgac
ctggcgcgcgccaccgaatacgctgccgaagacgctgacgtgaccctgcgcctgcaccgc
aagatgttcccgcaggtggaagccgcggcgggcctgcgccgcgtgtatgaagagatcgag
atgccggtctcggtggtgctgcagaaggtcgagcgcaacggcgtgctgatcgatgccgaa
cgcctggccgcgcagagcgccgagctgggccagcgcatgctggcgctggagcaggccgcc
tacgaggccgccggccagcccttcaacctgggctcgcccaagcagatcggcgagatcctg
ttcagccagatgaagctgccggtggtgaagaagaccgccagcggcgcgccctcgaccgac
gaagaggtgctgcagaagctggccgaggactacccgctgcccaagcttctgctggactac
cgcggcctggccaagctcaagtccacctataccgacaagctgcccaagatggtcaacccg
cagaccggccgcgtgcacaccagctacggccaggccaccgcggtgaccggccggctggcg
tcgaccgagcccaacctgcagaacatcccggtgcgcaccgaggagggccgccgcatccgc
gaagcctttatcgccgagcccggcagcgtgatcgtgtcggccgactactcgcagatcgag
ctgcgcatcatggcccatatctcgggcgacgagaacctgctgcgcgcctttgccaacggc
gaggacatccaccgcgccacggccggcgagatcttcggcgtggagcgcgaggccgtcagc
agcgagcagcgccgctacgccaaggtgatcaacttcggcctgatctacggcatgagcgcg
ttcggcctggccggcaacctgggtatcgagcgcgaggccgcaaagcactacatcgaccgt
tatttcatgcgctacccgggcgtggcccactacatggaagagacccggcagaccgcgcgc
gagcaaggctatgtcgagaccgtgttcggccgccggctgtggctgcccgacatcaacggc
ggcagcggcccgcgccggcaggccgccgagcgcgccgccatcaacgcgccgatgcagggc
accgccgccgacctgatcaagctgtcgatgatcgcggtgcagggctggctggagcgcgac
gggctgcagacgcgccagatcatgcaggtgcacgatgaactggtgctggaggtgccggag
catgagctggagctggtcaaggtgcggctgccggagctgatgtgctcggtggcgcagctg
cgcgtgccgctggtggccgaagtgggcagcggcgccaactgggaagaagcgcactga
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