Cupriavidus necator H16: H16_A3163
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Entry
H16_A3163 CDS
T00416
Symbol
h16_A3163
Name
(GenBank) transcriptional regulator, Exoribonuclease II-family
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
reh
Cupriavidus necator H16
Brite
KEGG Orthology (KO) [BR:
reh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
reh03016
]
H16_A3163 (h16_A3163)
Enzymes [BR:
reh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
H16_A3163 (h16_A3163)
Transfer RNA biogenesis [BR:
reh03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
H16_A3163 (h16_A3163)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
CAJ94238
UniProt:
Q0K6Y3
LinkDB
All DBs
Position
1:complement(3422800..3424902)
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AA seq
700 aa
AA seq
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MQLLFEEGGEIRAGTVLNQQGEAYQVELPAGKRTKVKSRDVLLQFAQPSAIELVRQTGDM
MAEIDLDFLWECAPEAEFGFTELAAEYYGAEPGPVQQAALAMALHGNPVYFRRKGRGRYQ
RAPEDQLKAALAALERKRQQALVQAEYEEQLKALTLPETFRNKVLQLLFKPDKNSLEYKA
MDAACTALGMTPMRLMVAAGGVASARALHEAKFLAECFPKGTGFPETDVPEPPADLPVAD
VEAFSIDDVTTTEIDDALSVTRLPDGKLRIGIHIAAPALGIRRSEPLDAVARQRLSTVYF
PGDKITMLPDAVVERYTLQEGRTCPALSLYVTVDPTVWLITGSETRAEMVPIAANLRHNL
LDDVITEAALAAGTGDYPFRDALTQLWHFAGYLYDERQKARLASGLRPETHNRADFNFYL
DDQADGSQRVRIEQRKRGSPLDKIVAELMILANSTWGKLLADNGVPGIYRTQKAWGMHRT
RMQTYPAPHEGLGVAQYAWSTSPLRRYVDLVNQWQILAVAQHGVTAKLVAPFKPKDADLL
AAVADFEGTYAAYADHQSTMERYWCLRWLKQEKRERMVASVLKEGAVRFTEIPLVTRVPE
LVQAQRGTQVLLEIGETDEITLEVSCRVLEIFAGEGEVPEEELESDEEAAELSAEAAADA
AAEEAAEQAAGVSDEAPAEAGDDDAGAASGERDTGTPAVG
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgcagttgctgttcgaagaaggcggcgaaatccgcgccggcaccgtgctgaaccagcag
ggcgaggcttaccaggtggagctgccagccggcaagcgtaccaaggtcaagtcgcgcgac
gtgctgctgcagttcgcgcagccgtcggcaatcgagctggtgcgccagaccggcgacatg
atggccgagatcgacctggacttcctgtgggaatgcgcgcccgaggctgaattcggcttc
accgagctggccgccgagtactacggcgccgagcccggcccggtgcagcaggcggcgctg
gcgatggcgctgcacggcaacccggtgtacttccgccgcaaggggcgcggccgctaccag
cgcgcgcccgaagaccagctcaaggcggcgctggccgcgctcgagcgcaagcgccagcag
gcgctggtgcaggccgagtacgaagagcagctcaaggcgctgacgctgcctgagaccttc
cgcaacaaggtgctgcagctgctgttcaagccggacaagaacagcctggaatacaaggcc
atggacgccgcctgcaccgcgctgggcatgaccccgatgcggctgatggtggccgccggc
ggcgtcgccagtgcgcgcgcgctgcatgaggccaagttcctggccgagtgcttccccaag
ggcacgggctttccggaaaccgacgtgcccgagccgcccgccgacctgccggtggccgac
gtggaggcattctcgatcgacgacgtcaccaccaccgagatcgacgatgcgctgtccgtg
accaggctgcccgacggcaagctgcgcatcggcatccatatcgccgcgcccgcgctgggc
attcgccgcagcgaaccgctcgatgcggtcgcgcgccagcggctgtccacggtctatttc
ccgggcgacaagatcaccatgctgcccgacgccgtggtggagcgctacacgctgcaggaa
gggcgcacgtgcccggcgctgtcgctgtatgtgacggtggacccgaccgtgtggctgatc
accggcagcgagacccgcgccgagatggtgccgatcgccgccaacctgcgccacaacctg
ctcgacgatgtcatcaccgaggctgcgcttgccgcgggcaccggcgactacccgttccgc
gacgcgctgacgcagctgtggcactttgccggctacctgtacgacgagcgccagaaggcg
cgcctggccagcggcctgcgccctgagacccacaaccgcgccgacttcaatttctacctg
gacgaccaggccgacggcagccagcgcgtgcgcatcgaacagcgcaagcgcggctcgccg
ctggacaagatcgttgccgagctgatgatcctggccaacagcacctggggcaagctgctg
gccgacaacggcgtgccgggcatctaccgcacgcagaaggcgtggggcatgcaccgcacc
cgcatgcagacctacccggcaccccacgagggcctgggcgtggcgcagtacgcttggagc
acctcgccgctgcgccgctatgtcgacctggtcaaccagtggcagatcctggcggtggcc
cagcacggcgtgaccgccaagctggtggcgccgttcaagcccaaggacgccgacctgctg
gccgcggtggcggacttcgaaggcacttacgccgcctacgccgaccaccagtcgaccatg
gagcgctactggtgcctgcgctggctcaagcaggaaaagcgcgagcgcatggtggcctcg
gtgctcaaggaaggcgcggtgcgctttaccgagatcccgctggtcacgcgcgtgcccgaa
ctggtgcaggcgcagcgcggcacgcaggtgctgctggagatcggcgagaccgacgagatc
acgctggaagtgtcgtgccgggtgctggagatcttcgccggtgaaggcgaagtgcccgag
gaagagctggaaagcgacgaggaagccgcggagctgtccgccgaagccgctgccgacgcg
gccgccgaggaagcggccgagcaggccgccggggtctcggacgaagccccggccgaagcg
ggcgacgacgatgccggcgcggcgtcgggcgagcgcgacaccggcaccccggcggtcggc
tga
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