Cupriavidus necator H16: H16_A3237
Help
Entry
H16_A3237 CDS
T00416
Symbol
h16_A3237
Name
(GenBank) response regulator containing sigma54 activator and Fis-type DNA-binding domains
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
reh
Cupriavidus necator H16
Pathway
reh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
reh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
H16_A3237 (h16_A3237)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
reh02022
]
H16_A3237 (h16_A3237)
02035 Bacterial motility proteins [BR:
reh02035
]
H16_A3237 (h16_A3237)
Two-component system [BR:
reh02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
H16_A3237 (h16_A3237)
Bacterial motility proteins [BR:
reh02035
]
Pilus system
Twitching motility proteins
H16_A3237 (h16_A3237)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
FleQ
AAA_16
Imm5
Motif
Other DBs
NCBI-ProteinID:
CAJ94312
UniProt:
Q0K6Q9
LinkDB
All DBs
Position
1:complement(3497522..3499189)
Genome browser
AA seq
555 aa
AA seq
DB search
MRPPPDLSQPSHHPMPPRMSRAPDPILVIDDEADLRELLDISIRRMGHDVVLAGSLAEAR
EKLAQRRYSLVLTDMRLGDGLGIEIVRQLSAAPERIPVAVITAYGSADNAVEALKAGAFD
YIAKPVSLEQLRSLVLNALGRQQRDSTDAEAAAAEQAADRAAALLPGHSAAMLEVRRSLS
RLARSMAPVVISGESGSGKERAARAIHATSGRAAHPFIAVNCGAIPENLMESEFFGHVKG
AFTGADGERGGFFQAANGGTLLLDEVADLPLPMQVKLLRALQERRVRKIGASREDAVDVR
VMCASHKDLAAMVSAGQFRQDLYYRLNVLALRMPTLRERGEDIPVLARAILDHLAVRYGD
PRPKRLSPAALQRLVAYPFPGNVRELENLLERAYAFAESEEIELADLGPLDAGAERAGLM
HAPAPAMAPTNYSAPWGAAGMWAPVPPAAAPAPAPAEPPPVVPAPASAPEPEPAGDPAER
ACRGIVFPIDLQARLEAVERELILQALAQTNFNRTAAAPLLGLNLRQLRYRIQQLGIREA
MDAAERSTVEGEGTS
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgcggccgccgcctgacctgtcccaacccagccaccaccccatgccaccccgaatgtcc
cgagcgcccgatcccatcctggtcatcgacgacgaggccgacctgcgcgagctgctggac
atctcgatccgccgcatgggccatgacgtggtgctggccggctcgctcgccgaggcgcgc
gagaagctggcgcagcgccgctacagcctggtgctgaccgacatgcgcctgggcgacggc
ctgggcatcgagatcgtgcgccagctgtcggccgcgccggaacgcatcccggtggcggtc
atcaccgcctacggcagcgccgacaacgccgtggaagcactcaaggccggcgccttcgac
tacatcgccaagccggtatcgctggagcagctgcgcagcctggtgctgaacgcgctgggc
cgccagcaacgcgacagcaccgatgccgaagccgccgcggccgagcaggccgccgaccgc
gccgccgccctgctgcccggccattccgccgccatgctggaggtgcgccgttcgctgtcg
cggctggcgcgcagcatggcgccggtggtgatcagcggcgaatccggcagcggcaaggag
cgcgccgcgcgcgccatccacgcgaccagcggccgggccgcgcatccgtttatcgccgtc
aactgcggcgccatccccgagaacctgatggagtccgagttcttcggccatgtcaaaggc
gccttcaccggtgccgacggggagcgcggcggcttcttccaggccgccaacggcggcacg
ctgctgctcgacgaggtggccgacctgccgctgccgatgcaggtcaagctgctgcgcgcg
ctgcaggagcgccgcgtgcgcaagatcggcgccagccgcgaagacgccgtcgacgtgcgc
gtgatgtgcgccagccacaaggacctggcggcgatggtgtcggccgggcagttccggcag
gacttgtactaccgcctgaacgtgctggcgctgcgcatgcccacgctgcgcgagcgcggt
gaagacatcccggtgctggcgcgcgccatcctggaccacctggcggtgcgctacggcgac
ccgcgccccaagcggctgtcgccggcggcgctgcaacggctggtggcctatccgttcccc
ggcaacgtgcgcgagctggagaacctgctggagcgcgcctacgcctttgccgagagcgaa
gagatcgagctggccgacctgggcccgctggacgccggcgccgagcgcgccgggctgatg
catgcccccgcgccggcgatggcgcccaccaactattccgccccctggggcgccgcaggc
atgtgggcgccggtgccgccggccgccgcgcccgcgccggccccggcagagccgccgccc
gtggtgccggccccggccagcgcgcccgaacccgagcccgccggcgatcccgccgaacgc
gcctgccgcggcatcgtcttcccgatcgacctgcaagccaggctggaagccgtggagcgc
gagctgatcctgcaggcgctggcgcagaccaacttcaaccgcaccgcggccgcgccgctg
ctgggcctgaacctgcgccagctgcgctaccgtatccagcaactgggcatccgcgaggcc
atggacgccgccgaacgcagcaccgtggaaggcgagggcacgtcatga
DBGET
integrated database retrieval system
