Cupriavidus necator H16: H16_B0196
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Entry
H16_B0196 CDS
T00416
Symbol
sbcC
Name
(GenBank) DNA repair exonuclease, SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
reh
Cupriavidus necator H16
Brite
KEGG Orthology (KO) [BR:
reh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
reh03400
]
H16_B0196 (sbcC)
DNA repair and recombination proteins [BR:
reh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H16_B0196 (sbcC)
Archaeal homologous recombinant proteins
H16_B0196 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_29
AAA_16
nSTAND3
ABC_tran
AAA_22
NACHT
TsaE
cobW
AAA
AAA_21
GTP_EFTU
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
CAJ94997
UniProt:
Q0K4S7
LinkDB
All DBs
Position
2:220690..223752
Genome browser
AA seq
1020 aa
AA seq
DB search
MRPLHLTLQAFGPFAATEQVDFTRLGEQAFVLIHGPTGAGKTTLLDAICFALYGDTSGGE
RSAQAMRSANAAPALRTEVTLEFSLGAQRWRVVRSPVQERPKQRGEGWVTEPAKAQLDLH
DGNDWISKASQPARVSDAVRDLLGFDSAQFRQVIVLPQGRFRELLTASSQARQAILERLF
RTELYRRVEELLKAEAAVIRRDAERITIQRDEALRQVGVESAQALAEGIEALQAELQALQ
GQEQGARATLAAAQAALGAGEQVAARLRERQQAQAAHAALLARQPAMEHERARLHAAQRA
ARVRPALQAWQAAQRDQAASAVALTQSGEQAARAAQQATQAAAALQAEKARAEARQSAQR
RVSQLADMLPRAQQLGAQLAALQAAEARQVAAATARERAAAQLATRQADAVGAESALAQG
QLAAAQAQATALQLAALQERARQLDRHQQAVRALDAANAQAANAAAAEQQALRQREQCRA
ALAEAEAAWRAGQAARLAASLAAGDACPVCGSTAHPAPAQHVAAPLSDQALEQARHAALE
AESHAVRCTGQHQAAQAAIAQARERLDELAQALGEVGDESARKLKAEITGLEAALAEGRQ
AAASLAQREAAIVSCRTALAAADAASRDATAGAEAAAQALAHCRGEWQANSAQVPEDSRD
PVALGEALRQAQAMLAALEQALVAAQAAERQAAADAAGAQAGLVSAQQAQAQASNRLAEA
ESVLAQALAQQGFADVPAHAAACLGDDAMQALDATLRAFDTQLATAADWRERAEAAAQAL
DAPDLDGLRAARDASAAAVEALVRQQAERGRSRDTLLQCQLRLQQLDAQGRDIEARYAVL
GRLAEVANGNNPRRMTFQRFVLATLLDEVLEAASARLLAMSRGRYVLQRVREQADQRSAG
GLDIEVFDHDTGAARPANTLSGGEGFLASLSLALGLADVVQSRAGGIQLDTLFVDEGFGT
LDPESLDFAIRTLLDLQQAGRLVGIISHVTELRERIDVRLEVRPGVGGSRVLLTGVATLA
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgagaccgctgcatttgacgctgcaggccttcggtccctttgccgcgaccgagcaggtc
gatttcacgcggctgggcgagcaggccttcgtactgatccatggccccaccggcgcgggc
aagaccacgctgctcgacgcgatctgctttgcgctgtacggcgatacctccggcggcgag
cgcagtgcgcaggccatgcgcagcgccaacgccgcgcccgcgctgcgcaccgaggtgacg
ctggagttcagcctgggcgcgcagcgctggcgcgtggtgcgctcgccggtacaggagcgg
cccaagcagcgcggcgagggctgggtgaccgagccggccaaggcccagctggacctgcat
gacggcaacgactggatcagcaaggccagccagcccgccagggtcagcgacgccgtgcgc
gacttgctgggtttcgacagtgcccagttccgccaggtgatcgtgctgccgcaggggcgc
ttccgtgaattgctgaccgccagttcgcaggcgcgccaggccattctggagcgcctgttc
cgcaccgagttgtaccggcgcgtggaagagctgctgaaggccgaggccgccgtcatccgc
cgcgatgccgagcgcatcaccatccagcgcgacgaagcgctgcgccaggttggggtggaa
tcggcgcaggcgctggcagagggaatcgaggccttgcaggccgagttgcaggcgctgcag
gggcaggaacagggcgcgcgggccacgctggccgcagcgcaggcggcgctgggtgccggc
gagcaggtggcggcgcggttgcgggaacgccagcaggcgcaggccgcgcacgcggcgctg
ctggcgcgccagccagccatggagcatgagcgcgcgcgcctgcacgccgcccagcgcgcc
gcgcgtgtcaggccggcactgcaggcgtggcaagccgcgcagcgcgaccaggccgccagc
gccgttgccttgacgcagtctggcgagcaggcggcgcgcgccgcgcaacaggccacgcag
gcggctgccgccttgcaggccgaaaaggcacgcgctgaagcgcgccagtccgcgcagagg
cgggtttcgcagctggcagacatgctgccgcgcgcgcagcagctgggtgcgcagctggcc
gcgctgcaggcggccgaagccaggcaggtggcagccgccactgcgcgcgaacgcgccgcc
gcacagcttgccacgcggcaagccgatgccgttggcgcggagtccgcgctggcgcaaggc
cagcttgctgccgcgcaggcacaggccacggcgttgcagctggccgcgttgcaggaacgc
gcgcggcagcttgaccgtcatcagcaagctgtccgggcactggatgccgcgaacgcacag
gcggccaatgccgccgctgccgaacagcaagccctgcgccagcgcgagcagtgccgcgcc
gcgctggccgaagcggaagccgcctggcgcgccgggcaggccgcgcggctggccgcaagc
ctggcagcgggcgatgcctgcccggtctgcggcagcaccgcgcacccggcaccggcgcag
cacgtggcggcgccgctgtcggaccaggcgctggagcaggcccgccacgccgcgctcgag
gctgaatcccatgcggtgcgctgcaccggccagcaccaggcggcacaagctgccattgcc
caggcgcgcgagcggctggacgaactggcgcaggcgctgggcgaggtcggcgacgagtcc
gcccgcaagctgaaagccgagatcacgggactggaagcggcactggccgaaggccggcaa
gcggcggcaagccttgcgcaacgcgaagccgccatcgtcagctgccgcacggcgctcgca
gcggcggacgccgccagccgcgatgccacggccggcgccgaggccgctgcccaggcgctg
gcccactgccgtggcgaatggcaggccaacagtgcgcaggttcccgaggattcacgcgac
cccgtggcgctgggcgaggccctgcggcaggcgcaggctatgctcgccgcgctggaacag
gcgctggtcgctgcgcaggcggccgagcgccaggctgcggcggacgcagccggggcacag
gctggactggtctcggcacagcaggcacaggcccaggcgtctaaccgcctggccgaggcc
gaatccgtgcttgcacaggcgctcgcgcagcaaggctttgccgatgtgccggcccacgcg
gccgcctgtcttggcgacgatgccatgcaggcgctcgacgcgacgctgcgcgcgttcgat
acccagctggccacagccgccgactggcgcgaacgcgccgaggccgccgcgcaagcgctg
gacgcaccggatctggacggcctgcgcgcagcgcgcgatgcgtcggccgccgcggtggaa
gccctggtccggcaacaggccgagcgcggccgttcgcgcgacacgctgctgcagtgccag
ctgcgcctgcagcagctggacgcgcaggggcgcgacatcgaggcacgctacgcggtgctg
ggccggctggccgaagtcgccaacggcaacaacccgcgccgcatgaccttccagcgcttc
gtgctggccacactgctcgatgaggtgctggaagccgcttcggcgcgtttgctggcgatg
agccgcggccgctatgtgctgcagcgcgtgcgcgagcaggcagaccagcgcagtgcgggc
ggactggatatcgaagtgttcgaccacgataccggcgcggcgcgtccggccaatacgctg
tcaggtggcgagggcttcctcgcgtcgttgtcgctggcgctggggctggccgacgtggtg
cagtcgcgcgccggcggcatccagctcgatacgctgtttgtcgacgaaggctttggcacg
ctcgatcccgagagcctggactttgccatccgtacgctgctggacctgcagcaggcaggg
cggctggtggggatcatttcgcacgtcaccgaattgcgtgagcgcatcgacgtgcggttg
gaggtgcgccctggggttggcggcagccgggtactgttgacgggcgtggcgaccctcgcg
taa
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